PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OMO63189 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
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Family | WRKY | ||||||||
Protein Properties | Length: 427aa MW: 47264.7 Da PI: 6.5226 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 77.4 | 1.7e-24 | 98 | 155 | 1 | 58 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnh 58 ldDgy WrKYGqK + gs++pr+YY+C + +Cp+kk ve +++d+++ +tY+g H h OMO63189 98 LDDGYIWRKYGQKCIMGSQYPRNYYKCITLRCPAKKWVEPDTSDKSFSFVTYQGIHIH 155 59******************************************************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 427 aa Download sequence |
MEERLNATDL TESIPSTPEE CSFSSDKSKR VEVEDDKINL ASEICEVDGD EDEPKAKRWN 60 CTNNIENKDL ISCMKENTVA RRIVRAKGVA IRTRNELLDD GYIWRKYGQK CIMGSQYPRN 120 YYKCITLRCP AKKWVEPDTS DKSFSFVTYQ GIHIHVRQPY VNELNNCLSQ VCHDHGADNM 180 ENAAEGAKAV MNFTKEYPGF PEASIGDESQ GSEDKSLLEV SREAEGQQPD GKAETMRTSS 240 STMPTPSIFS SNYLTISPTS KPRPAKFSDP SPQMNTSNVL ASMTMTTGEF VVQSLDQKSD 300 SSNSQQSISQ KDNKSTDVFH LPQPSPSTST STSAITQLSN AKVSTPSGGG KVGIGGPMVK 360 KWKSTKPKVI TLSNPGDFRE MVQRMTGSRG KTKNDRKTYK EEVEDEKGQG VVESGHFIPF 420 RIGGPQT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G04880.2 | 3e-19 | WRKY family protein |
Link Out ? help Back to Top | |
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Ensembl | OMO63189 |