PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OMO63092

Organism

Corchorus capsularis

Taxonomic ID

210143

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus

Family

bZIP

Protein Properties

Length: 472aa MW: 53139.9 Da PI: 7.4109

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OMO63092	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	34.8	3.7e-11	180	215	5	40
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLea 40 k rr+++NReAAr+sR+RKka++++Le+ L++ OMO63092 180 KTLRRLAQNREAARKSRLRKKAYVQQLETSRIRLTQ 215 7789************************86555554 PP

Sequence ? help Back to Top
Protein Sequence Length: 472 aa Download sequence
MASSRGNMMN HSNIQLDQHN HHHQNHQHHQ NQQHQIQEHH QNQIPYAVMQ SSSSSSIPPG 60 NFISKDTGAY DLGELDQALF LYLDGQDPST IQEQRHNSGM RPPTLNIFPS QPMHTSTGLV 120 SPATSGSKRP SEPSMELANA RNDASASAPD QPAKAVKREG NRKGPTSSSE QEGPKTPDPK 180 TLRRLAQNRE AARKSRLRKK AYVQQLETSR IRLTQLEQEL QRARTQGMFF GGGGVLGGEQ 240 GLPVGINNLS SEAAMFDMEY ARWLEEHHRL MCELRAAVQE HLPENELRLF VDNCLAHYDE 300 MMNLKGMVAK SDVFHLVSGM WKTPAERCFM WMGGFRPSEL IKVILNQIEP LTEQQIMGIC 360 GLQQSTQEAE EALSQGLEAL NHSLSDIITS DSLSCPPNMT NYMGQMAIAM NKLSTLEGFV 420 RQADNLRHQT IHRLHQILTT RQAARCLLAI AEYFHRLRAL SSLWLARPRQ EQ

Sequence ? help Back to Top

Protein Sequence Length: 472 aa Download sequence

MASSRGNMMN HSNIQLDQHN HHHQNHQHHQ NQQHQIQEHH QNQIPYAVMQ SSSSSSIPPG  60
NFISKDTGAY DLGELDQALF LYLDGQDPST IQEQRHNSGM RPPTLNIFPS QPMHTSTGLV  120
SPATSGSKRP SEPSMELANA RNDASASAPD QPAKAVKREG NRKGPTSSSE QEGPKTPDPK  180
TLRRLAQNRE AARKSRLRKK AYVQQLETSR IRLTQLEQEL QRARTQGMFF GGGGVLGGEQ  240
GLPVGINNLS SEAAMFDMEY ARWLEEHHRL MCELRAAVQE HLPENELRLF VDNCLAHYDE  300
MMNLKGMVAK SDVFHLVSGM WKTPAERCFM WMGGFRPSEL IKVILNQIEP LTEQQIMGIC  360
GLQQSTQEAE EALSQGLEAL NHSLSDIITS DSLSCPPNMT NYMGQMAIAM NKLSTLEGFV  420
RQADNLRHQT IHRLHQILTT RQAARCLLAI AEYFHRLRAL SSLWLARPRQ EQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06839.3	1e-174	bZIP family protein

Link Out ? help Back to Top
Ensembl	OMO63092