PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

OMO62118

Organism

Corchorus capsularis

Taxonomic ID

210143

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus

Family

bZIP

Protein Properties

Length: 261aa MW: 28974.3 Da PI: 5.9971

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OMO62118	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	25.5	2.9e-08	90	132	8	50
HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 8 rrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 rr NReA r++R++Kka ++ Lee+vk+L N++L +l+ OMO62118 90 RRPLGNREAVRKYREKKKAHTAYLEEEVKKLRLLNQQLVRKLQ 132 77788*********************************98886 PP

Sequence ? help Back to Top
Protein Sequence Length: 261 aa Download sequence
MDDGEVELSD HVLLSNPDSS SNFQDSTSVD VDLIIDEFLK NTRTCTHTHT CNPPGPDATH 60 THTCYHTHTQ VITSEEDNHH NSDNKSLKPR RPLGNREAVR KYREKKKAHT AYLEEEVKKL 120 RLLNQQLVRK LQGQSILEAE VLRLRSLLVD LRAKIDGELG VFPFQKQCNN ATLPKEGDCG 180 MQSTGEAMGL QCQTDLPCFH PHAGSSSQPS INGSENMKIS WEGNCQPAII DCQANLNQIA 240 SVEGHHVNTV ETLVSCASQA E

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G16770.1	6e-27	bZIP family protein

Link Out ? help Back to Top
Ensembl	OMO62118