PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OMO61573
Organism
Corchorus capsularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
Family WRKY
Protein Properties Length: 333aa    MW: 36337.9 Da    PI: 8.6952
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OMO61573genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY95.34.2e-30169227259
               --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
      WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
               +Dgy+WrKYGqK+ ++++ pr+Y++C++a +Cpvkkkv+rsaedp++++ tYegeHnh 
  OMO61573 169 RDGYQWRKYGQKVTRDNPSPRAYFKCSFApTCPVKKKVQRSAEDPSILVATYEGEHNHA 227
               7***************************99****************************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 333 aa     Download sequence    
MESSTNWVDT TLDLNINLFH RPNKALKRES ATISGEVGES EVKLPVKQEA GVLMEELNRI  60
IAENKKLTEL LTILCENYNS LQSKFVELVN KNSENEAAAA AATLISKKRK AECEDYNNPN  120
MIGFSGRAES SSSDEESSKI RPKESNNNKA KISRACVRTS PSDNSLIVRD GYQWRKYGQK  180
VTRDNPSPRA YFKCSFAPTC PVKKKVQRSA EDPSILVATY EGEHNHAHPS PAELSLSPNS  240
NTIATPRSSA PAPSPPPKSS ITPTVTLELM QSAGTLAMAA EDQTKKAGDS PAAIQQILVQ  300
QMAASLTRDP NFTAALAAAI SGRVVDHTRI QKW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80840.12e-71WRKY family protein