PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OMO59112 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
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Family | TALE | ||||||||
Protein Properties | Length: 471aa MW: 53226 Da PI: 8.8669 | ||||||||
Description | TALE family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 30.7 | 5.5e-10 | 298 | 336 | 18 | 54 |
HHHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 18 lFek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 lFe ++yps +e+ LA+++gL+ +qV++WF N R + OMO59112 298 LFEHflHPYPSDSEKLMLARQTGLSRTQVSNWFINARVR 336 5665569******************************88 PP | |||||||
2 | BELL | 85.8 | 4.9e-28 | 169 | 240 | 1 | 72 |
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 er +++ k +kL +l+eV+k+Yk y++q+q v++sF++v glg+a+pY+ lA kai++hF +Lk ai +qi OMO59112 169 ERIQHRLKNSKLFLMLDEVYKKYKLYCQQMQSVVASFKCVSGLGNAAPYVCLAFKAIAKHFSSLKSAILHQI 240 688999****************************************************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 471 aa Download sequence |
MAGNYDEPFH IPQQNRRNRL RVTLGNNNNH EEAQEQLPSQ QLSLLSSSSS SSHQPTFMQN 60 PRDIYYQMFN GHGLSLSLSS QHQENSINLP MNLDAEKGNG NSILGSFLKQ NGQMTSCVPL 120 GPFTGYASVL KSSKFLKPAQ QILDDFCGIN NKVFDFPLDS LADPITCSER IQHRLKNSKL 180 FLMLDEVYKK YKLYCQQMQS VVASFKCVSG LGNAAPYVCL AFKAIAKHFS SLKSAILHQI 240 RFTDKTVNNA SARKDNVPSL WTSDQIPPIH SLPFLQHPLW RSQRGLPDHA VAVLKAWLFE 300 HFLHPYPSDS EKLMLARQTG LSRTQVSNWF INARVRLWKP MVEEIHMLEL RQAQRTFSEA 360 TSQEVHDIQT KRARNNNFQT DHEQSQLQKT TSVSYKNLGD NNQHVGSVGG GNSSNFCLAL 420 SLNQNNGHID LAQPFPMNLC HNNFNFGTDG DQLSLKAGFD VERQNHHGKN F |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G02030.1 | 5e-77 | TALE family protein |
Link Out ? help Back to Top | |
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Ensembl | OMO59112 |