PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OMO58795 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
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Family | MYB_related | ||||||||
Protein Properties | Length: 129aa MW: 14880.2 Da PI: 10.8133 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 53.1 | 7.4e-17 | 14 | 65 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-H......HHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtW......ktIartmgkgRtlkqcksrwqky 47 +g+WT+eEd++l+ +v+++G g+W ++Ia++++ +Rt++++k++w+ + OMO58795 14 KGAWTAEEDQKLIAYVQKHGEGSWrnvpagAAIAKYLP-KRTDNEIKNYWNAH 65 79********************8822223357889999.***********977 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 129 aa Download sequence |
MGRTEFCTGD GLKKGAWTAE EDQKLIAYVQ KHGEGSWRNV PAGAAIAKYL PKRTDNEIKN 60 YWNAHLKKRL ANMGIDPVTH NPLFPDRNSN IVKPPMAHPE KFSQKMKPMH LINSPRRRRQ 120 GLARLRLYY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G61420.2 | 6e-33 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | OMO58795 |