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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | OMO56844 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
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| Family | BES1 | ||||||||
| Protein Properties | Length: 324aa MW: 34732.6 Da PI: 8.8786 | ||||||||
| Description | BES1 family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | DUF822 | 223.3 | 4.8e-69 | 3 | 147 | 1 | 149 |
DUF822 1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspesslqsslkss 101
g+sgr ptwkErEnnkrRERrRRaiaakiy+GLRaqGnyklpk++DnneVlkALc eAGw+ve+DGttyrkg+kp+ +e ag+s+++s +ss+q s++ss
OMO56844 3 GASGRLPTWKERENNKRRERRRRAIAAKIYSGLRAQGNYKLPKHCDNNEVLKALCSEAGWIVEEDGTTYRKGCKPP-PSELAGASTNISACSSIQPSPQSS 102
689*************************************************************************.************************ PP
DUF822 102 alaspvesysaspksssfpspssldsislasaasllpvlsvlslvsss 149
+++spv+sy+asp+ss psp+++d +++ + llp+l++ ++++++
OMO56844 103 SFPSPVPSYHASPSSSLCPSPTRFDANPS---TYLLPFLQNIASIPNN 147
***************************88...59******99988776 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 324 aa Download sequence |
MTGASGRLPT WKERENNKRR ERRRRAIAAK IYSGLRAQGN YKLPKHCDNN EVLKALCSEA 60 GWIVEEDGTT YRKGCKPPPS ELAGASTNIS ACSSIQPSPQ SSSFPSPVPS YHASPSSSLC 120 PSPTRFDANP STYLLPFLQN IASIPNNLPP LRISSSAPVT PPLSSPTSRG SKPKADWESL 180 SNGSLNSFRH PLFATSAPSS PTRRQHHTPA TIPECDESDA STVDSGRWVS FQTVASTAAA 240 AAAAAAAPPS PTFNLVKRAV QQNNHFQDGA RGHGGVTWGT VTELGRGSEF EFENGRVKPW 300 EGERIHDIGV DDLELTLGTS KTCA |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT1G75080.2 | 4e-92 | BES1 family protein | ||||
| Link Out ? help Back to Top | |
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| Ensembl | OMO56844 |
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for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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