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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OMO56614 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
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Family | WRKY | ||||||||
Protein Properties | Length: 371aa MW: 40578.3 Da PI: 9.993 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 100.6 | 9.2e-32 | 300 | 357 | 3 | 59 |
-SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 D y+WrKYGqK++kgs++pr+YY+C+s gCp++k+ver+ +dp+++++tYegeHnh+ OMO56614 300 DDYSWRKYGQKPIKGSPHPRGYYKCSSVrGCPARKHVERALDDPSMLIVTYEGEHNHS 357 99************************988****************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 371 aa Download sequence |
MAVELMMSYR NNNNSFTSKM EENAVQEAAS GLESVEKLIR LLSQTQQQQQ QQNQSFNNNQ 60 EKYQSSTTPS SNKSSLDLEM DCKAAADVAV SKFKRVISLL GRTRTGHARF RRAPVGVTPP 120 FAAATNSNST STVSPPVSQN QANQELETKV YYATPIQQIP PPVSYHPPPP AHHHHHHHDF 180 LSVKSGGLER KDSSTTINFS YSSAGGNSFM SSLTGDTDSK QPSSSSAFQI TNLSQVSSAG 240 KPPLSSSSFK RKCSSETLAS GKCSGSSAGR CHCSKKRKLR SKRVVRVPAI SLKMADIPPD 300 DYSWRKYGQK PIKGSPHPRG YYKCSSVRGC PARKHVERAL DDPSMLIVTY EGEHNHSLSV 360 AETSNLILES S |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G24240.1 | 2e-71 | WRKY family protein |
Link Out ? help Back to Top | |
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Ensembl | OMO56614 |