PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OMO55970
Organism
Corchorus capsularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
Family bZIP
Protein Properties Length: 349aa    MW: 39461.8 Da    PI: 6.1907
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OMO55970genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1353.1e-1165101440
               XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
    bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLea 40 
               +k +rr+++NReAAr+sR+RKka++++Le+   +L +
  OMO55970  65 DKIQRRLAQNREAARKSRLRKKAYVQQLENSRLKLIQ 101
               689**************************86555554 PP
Sequence ? help Back to Top
Protein Sequence    Length: 349 aa     Download sequence    
MGIYEPIHHQ IGMWGENFKT NGDPNTSASV IVEVDNKLEN ESETASHEML APSNKYDQEA  60
SKPIDKIQRR LAQNREAARK SRLRKKAYVQ QLENSRLKLI QLEQELDRAR QQGLYIGGGL  120
ESSHLGFSGG VNPGIAAFEM EYGNWMEEQN RQICELRTAL TAHISDVELR ILVESGMSHY  180
FELFRMKSTA AKADVFYVMS GMWKTSAERF FSWIGGFRPS ELLKVLVTQL DPLTEQQFLE  240
VCNLKQSCQQ AEDALSQGME KLQENVSVTV AGQLGDGSYI PQVATAMEKL EALVSFVNQA  300
DHLRQETLQQ MSRILTTRQA ARGLLALGEY FQRLRALSTL WATRPREPA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65210.20.0bZIP family protein