PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

OMO55778

Organism

Corchorus capsularis

Taxonomic ID

210143

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus

Family

bZIP

Protein Properties

Length: 258aa MW: 28478.8 Da PI: 10.5362

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OMO55778	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	48.1	2.6e-15	188	245	4	61
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklks 61 ++r +r++kNRe+A rsR+RK+a++ eLe +v+ L +eN +Lkk+ e+l+ +a+ s OMO55778 188 DRRHKRMIKNRESAARSRARKQAYTNELELEVAHLMEENAKLKKQQEQLRVAAAAQLS 245 689*********************************************9987776555 PP

Sequence ? help Back to Top
Protein Sequence Length: 258 aa Download sequence
MLSSTGGELD TNYSNSKATI SLNRVSSVSS KSSSSTSSSP SPFSPLLLPN QTSHRPKTME 60 EVWKDINLAS LHDHSSRESL SLNPRALQNP HNPNFMLQDF LARPFGKEPP TNKEATLYGS 120 PLPQPPATIL SLNSGQGFDF HEPNSRLQSN PISNLTTFNC PFEALASSSA LASFGKKRVQ 180 ESDSSSGDRR HKRMIKNRES AARSRARKQA YTNELELEVA HLMEENAKLK KQQEQLRVAA 240 AAQLSKKRTL QRTSTAPF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35900.1	3e-65	bZIP family protein

Link Out ? help Back to Top
Ensembl	OMO55778