PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OMO55511 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
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Family | MYB_related | ||||||||
Protein Properties | Length: 127aa MW: 14872.2 Da PI: 10.7483 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 48.3 | 2.3e-15 | 27 | 72 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg + +E +l+++++k+lG++ W++Ia +++ gRt++++k++w+++l OMO55511 27 RGDFEDDEVDLIIRLHKLLGNR-WSLIAGRIP-GRTANDVKNYWNTHL 72 788999****************.*********.************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 127 aa Download sequence |
MALMCLNRCR KSCRLRWLNY LKPNIKRGDF EDDEVDLIIR LHKLLGNRWS LIAGRIPGRT 60 ANDVKNYWNT HLLKKYNPSS STKDYSKPKN AHHDQIPFNP KDNNHNVTIN SNNIVIKPLP 120 RTLPKKT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G66370.1 | 4e-40 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | OMO55511 |