PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OMO53911

Organism

Corchorus capsularis

Taxonomic ID

210143

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus

Family

bZIP

Protein Properties

Length: 655aa MW: 71882.8 Da PI: 7.4971

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OMO53911	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	35.2	2.7e-11	186	229	2	45
XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 +e kr r+++NRe+A+ sRqRKk ++eeLe+kv ++ + ++L OMO53911 186 EEQKRRARLMRNRESAQLSRQRKKHYVEELEDKVRAMHSTITDL 229 6889******************************9988766555 PP

Sequence ? help Back to Top
Protein Sequence Length: 655 aa Download sequence
MAEASMEPDL GSELESLATP PMDPLYFSAD LGLPLDNDND DFEITFDDLD QFYFPSDSEN 60 LHVPDSSAVA DSDVERYFNS SSPELGSCNG PDSSGNPRSP LSSLGSGNCA STVSETMNAS 120 SPDSENIIEQ KINVEEMGKM RASKRKKENE ETNSNKFRRS SLPTIINNSD SNSNNSIHDS 180 NALSKEEQKR RARLMRNRES AQLSRQRKKH YVEELEDKVR AMHSTITDLN NKPLPMPMYP 240 PMGYPWVPCA PPYVMKPPGS QVPLVPIPKL KPQKQPVPTS KAKKSESKTK KVASVSLLGM 300 LFFMLLVGGL VPIVKIRDDN ASIGSGFVGD GFYEVHRGRV LRVDGHLNRS NNIRDVEFAY 360 GKFDSKNRVH GRGSESDVEQ KETGAHSVPD YKGNGSEPLT ASLYVPRNDK LVKIDGNLII 420 HSVLASERAM ASHKASQINN KETGLAIPKH FSPALAFSDA RESRGKQSHE YRNPAERQMA 480 LSSGKADALK DHFKSSAADG KMQQWFREGL AGPMLSSGMC TEVFQFDVSA PGGIVPATSV 540 KNVSAEHRQN ATQLNKGRNR RILHGPVPLS GSDLNITEQH VGRNSRKENI QGNKTASSMV 600 VSVLVDPREA GDGDMDEMIV PKSLSRIFVV VLLDSVKYVT YSCMLPRSGP HLVTA

Sequence ? help Back to Top

Protein Sequence Length: 655 aa Download sequence

MAEASMEPDL GSELESLATP PMDPLYFSAD LGLPLDNDND DFEITFDDLD QFYFPSDSEN  60
LHVPDSSAVA DSDVERYFNS SSPELGSCNG PDSSGNPRSP LSSLGSGNCA STVSETMNAS  120
SPDSENIIEQ KINVEEMGKM RASKRKKENE ETNSNKFRRS SLPTIINNSD SNSNNSIHDS  180
NALSKEEQKR RARLMRNRES AQLSRQRKKH YVEELEDKVR AMHSTITDLN NKPLPMPMYP  240
PMGYPWVPCA PPYVMKPPGS QVPLVPIPKL KPQKQPVPTS KAKKSESKTK KVASVSLLGM  300
LFFMLLVGGL VPIVKIRDDN ASIGSGFVGD GFYEVHRGRV LRVDGHLNRS NNIRDVEFAY  360
GKFDSKNRVH GRGSESDVEQ KETGAHSVPD YKGNGSEPLT ASLYVPRNDK LVKIDGNLII  420
HSVLASERAM ASHKASQINN KETGLAIPKH FSPALAFSDA RESRGKQSHE YRNPAERQMA  480
LSSGKADALK DHFKSSAADG KMQQWFREGL AGPMLSSGMC TEVFQFDVSA PGGIVPATSV  540
KNVSAEHRQN ATQLNKGRNR RILHGPVPLS GSDLNITEQH VGRNSRKENI QGNKTASSMV  600
VSVLVDPREA GDGDMDEMIV PKSLSRIFVV VLLDSVKYVT YSCMLPRSGP HLVTA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	548	561	RQNATQLNKGRNRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G40950.1	1e-163	bZIP family protein

Link Out ? help Back to Top
Ensembl	OMO53911