PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OMO53189 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
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Family | NAC | ||||||||
Protein Properties | Length: 179aa MW: 21079.4 Da PI: 4.8311 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 88.7 | 1.1e-27 | 16 | 150 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleev..ikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrkn..ratk..sgyWkatgk..dkevl 93 lp G+rF Ptdeelv++y +kv ++l+++++ i+ ++ y++ P++L +++++e++w+fF+ d +++k+ r + g+W++ g +k++l OMO53189 16 LPIGYRFVPTDEELVNHYFMNKVLCNPLPASTFheIHATKFYSMPPKSLV-EFASDERQWFFFIDDDDDDDDDEKKKgiRRVGdgVGFWHSNGDeeEKPIL 115 699************************665443349*************6.7788999******999888754444311322234799***99755789** PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 + +g++ k L++++g+ ++++kt+W m++yrl OMO53189 116 DPNGNVLAFKLHLIYFSGTLSNPKKTHWSMDQYRL 150 *********************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 179 aa Download sequence |
MEGQDHIEDF GDHDQLPIGY RFVPTDEELV NHYFMNKVLC NPLPASTFHE IHATKFYSMP 60 PKSLVEFASD ERQWFFFIDD DDDDDDDEKK KGIRRVGDGV GFWHSNGDEE EKPILDPNGN 120 VLAFKLHLIY FSGTLSNPKK THWSMDQYRL PNQFYSLHNL KEEWAVGRLR RGRDYNFGF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G61110.1 | 8e-17 | NAC family protein |
Link Out ? help Back to Top | |
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Ensembl | OMO53189 |