PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OMO52653

Organism

Corchorus capsularis

Taxonomic ID

210143

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus

Family

bZIP

Protein Properties

Length: 180aa MW: 21111.4 Da PI: 5.5653

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OMO52653	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	51.3	2.5e-16	81	139	5	63
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 +++rr+++NRe+ArrsR RK+ ++eL v L +eN++L+++l++ ++ +k+ +e+ OMO52653 81 RKQRRMISNRESARRSRMRKQRHLDELWSQVVWLRNENHQLIDKLNHVSESHDKVLQEN 139 689***********************************************999999886 PP

Sequence ? help Back to Top
Protein Sequence Length: 180 aa Download sequence
MQPSEVSGLQ YLVPSNPSPY LAHFSMNQSN TPTFELNRFS NPMYNFYIPP QLQEINPHSP 60 CLSSNSTSDE ADEQQSLINE RKQRRMISNR ESARRSRMRK QRHLDELWSQ VVWLRNENHQ 120 LIDKLNHVSE SHDKVLQENV QLKEETSELR QMLSDMQLSS PYSTLRDLED ITLEHGLSDN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	94	101	RRSRMRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G30530.1	2e-58	bZIP family protein

Link Out ? help Back to Top
Ensembl	OMO52653