PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OMO51304
Organism
Corchorus capsularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
Family WRKY
Protein Properties Length: 415aa    MW: 44389.6 Da    PI: 5.7084
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OMO51304genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY96.81.5e-30192250259
               --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
      WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
               +D ++WrKYGqK++kgs++pr+YYrC+s+ gC+++k+vers  dp++++itY+g+H+h+
  OMO51304 192 SDPWAWRKYGQKPIKGSPYPRNYYRCSSSkGCSARKQVERSPVDPNIFIITYTGDHTHP 250
               699************************998****************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 415 aa     Download sequence    
MAEDWDLFAL VRSCTSAAHN SAIVSPPPAR NDLRTNEVEN RSRLHEDPLA CLASLKFEEE  60
DDPFSFPNLS EVRKSGSLKD SYKPFLAYPD PTTTTIITTT HQGIDPSSGG SNGQHHHQEQ  120
PPPLTPLFAF AQSGNHQHAV HVGVQQQEVL MMPAPATVVP LRNMQSQAPR ARKRKNQQKR  180
EVRQVTAENL SSDPWAWRKY GQKPIKGSPY PRNYYRCSSS KGCSARKQVE RSPVDPNIFI  240
ITYTGDHTHP RPTHRNSLAG STRNKLSTAQ RAAGAANNDS VPAETLPTAT ASASCSSPPS  300
GTSLSPISPT TPISAPEDAA SASLQNQDGG DNNGGEEEES ADMMALAESD EDDDDDLLIP  360
NVHVDEDIFK GLEHFIGGGA GNTQLGRSPT FSDNFTSWGA AGSSAAAGAA AGGGC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52830.14e-55WRKY family protein