PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OMO49644 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
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Family | NAC | ||||||||
Protein Properties | Length: 221aa MW: 25276.7 Da PI: 4.8273 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 51 | 4.7e-16 | 13 | 162 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.............kvkaeekew...yfFskrdkkyatgkrknratksgyWk 84 lppGfrF+Pt++e+++++ ++ +e+ l++ i+ +d+y++ePw+L k k+k+e+ke+ k+++k++t+++ +r++ g Wk OMO49644 13 LPPGFRFKPTQQEILKYFVRPAIETGFLPF--PITCCDLYTSEPWNLFdKraadcfwiytplkKLKNENKEIgmsIATQKKKRKTKTKENIERTAGCGSWK 111 79************************9999..79*************6346899999999998677777766533455555566667778889999***** PP NAM 85 atgkdkevlskkgel........vglkktLvfykgrapkgektdWvmheyrl 128 ++ k++++ g+l k+ L + k + W+mhey+l OMO49644 112 EKTL-KDIKDCAGKLlghgryylYDAKEGLGLGLDYGDKDHDDLWFMHEYTL 162 7654.777776666622223333444444444445555666899******97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 221 aa Download sequence |
MLRYSVDIGE GSLPPGFRFK PTQQEILKYF VRPAIETGFL PFPITCCDLY TSEPWNLFDK 60 RAADCFWIYT PLKKLKNENK EIGMSIATQK KKRKTKTKEN IERTAGCGSW KEKTLKDIKD 120 CAGKLLGHGR YYLYDAKEGL GLGLDYGDKD HDDLWFMHEY TLPKDEGPIP KKPRLENASA 180 SGASSLNDDF ASLDDDDEFL EYLYTVLTDS DETQILECLP D |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G10500.1 | 3e-09 | NAC family protein |
Link Out ? help Back to Top | |
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Ensembl | OMO49644 |