PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OMO49515
Organism
Corchorus capsularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
Family bZIP
Protein Properties Length: 389aa    MW: 43259.9 Da    PI: 9.4893
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OMO49515genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_139.61.2e-12306354557
               CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
    bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 
               +r+rr++kNRe+A rsR+RK+a++ eLe +  +L++eN +Lk+ +ee     +
  OMO49515 306 RRQRRMIKNRESAARSRARKQAYTVELELELNQLKQENAKLKQLVEE----NE 354
               69************************************988843333....33 PP
Sequence ? help Back to Top
Protein Sequence    Length: 389 aa     Download sequence    
MAISESESVA YGGGKTGSPP VQAPQLPHDE SAQDHSLASS NKQNSIFSLT LDEIQLKSGK  60
AFGSMNMDEF LANLWNVEDN QVPSQLNQND QPVVDKCIAT SSQPTLARQG SFSIPTPLCK  120
KTVDEVWFEI QKELPQQRKL SSMTDHEPPQ RQPTFGEMTL EDFLIKAGVV QEPASSSQQQ  180
QKKVMPVQPN GTSLEPNYGM GHVMGSSQQK MVTTMQNNNA TLDPNFGMGH VMGLAFPTHQ  240
IVPNNMAPAG SGYAAAYPIF TQSKTVMGDS SNNAENGNNT NNLLEPAMLH NKKRIIDGPP  300
EVVVERRQRR MIKNRESAAR SRARKQAYTV ELELELNQLK QENAKLKQLV EENERKRKQE  360
VMKRKQSSTA AQRKVDKMKT LRRTVSLGW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G44460.19e-56bZIP family protein