PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OMO49451
Organism
Corchorus capsularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
Family bZIP
Protein Properties Length: 306aa    MW: 34162.7 Da    PI: 8.7782
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OMO49451genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_150.35.2e-16251294548
               CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
    bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 
               +r++r++kNRe+A rsR+RK+a++ eLe kv  Le+eN++L+k+
  OMO49451 251 RRQKRMIKNRESAARSRARKQAYTNELEHKVSRLEEENERLRKR 294
               79****************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 306 aa     Download sequence    
MGIQTMGSQG DSGNNGKQSQ FQQLTRQNSM YSLTLDEVQN QLGDLGKPLS SMNLDELLKN  60
VWTAEANQSF GMETEGTALT NQTALQRQAS LSLASALSKK TVDEVWRDIQ QSKNDGEKKS  120
RERQPTLGEM TLEDFLVKAG VVAEASTDKK GGGSVVGVDL SVSPQFGQQG QWMQYPQQQY  180
QHPQQSMMGV FMPVQPIPQP LTVGPATVMD VSYPENPVPM PSPLMGTLSD SQASGRKRGA  240
PEDMIEKNVE RRQKRMIKNR ESAARSRARK QAYTNELEHK VSRLEEENER LRKRKLFLVE  300
LVMMLL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1291296LRKRKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56850.14e-62bZIP family protein