PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIW21826 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 245aa MW: 28851.1 Da PI: 5.3379 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 61 | 1.9e-19 | 41 | 93 | 4 | 56 |
-SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 +++f++eq++ Le Fe+++++ +++ +LA+ lgL+ rqV +WFqNrRa++k OIW21826 41 KRRFSDEQIRSLECIFESESKLEPRKKLQLATDLGLQPRQVAIWFQNRRARWK 93 568*************************************************9 PP | |||||||
2 | HD-ZIP_I/II | 119.5 | 1.8e-38 | 39 | 131 | 1 | 93 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 e+krr+s+eq+++LE Fe+e+kLep++K +la++Lglqprqva+WFqnrRAR+k+k++E++y++L+++yd+l+++ e+L++e+e+L+ el++ OIW21826 39 ENKRRFSDEQIRSLECIFESESKLEPRKKLQLATDLGLQPRQVAIWFQNRRARWKSKRMEQEYRKLRDEYDNLASRFESLKNEKESLQLELQK 131 58**************************************************************************************99986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 245 aa Download sequence |
MMEGDKYIQA SSKGKNVESL SSSSELQHQN PRKKKNKIEN KRRFSDEQIR SLECIFESES 60 KLEPRKKLQL ATDLGLQPRQ VAIWFQNRRA RWKSKRMEQE YRKLRDEYDN LASRFESLKN 120 EKESLQLELQ KLSDLTRESH EVKVAKENST EDGVSGSGYN NWRVEMKPSF SNEGLEDIEG 180 MHYSDDQNEK SIRSEKSEEI IQQQVLRMDE HEEIPLPSLE KWYNVDPSGI LDQSCSSSQW 240 LDLWT |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 32 | 43 | RKKKNKIENKRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G46680.2 | 2e-33 | HD-ZIP family protein |
Link Out ? help Back to Top | |
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Ensembl | OIW21826 |