PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

OIW21501

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

C2H2

Protein Properties

Length: 476aa MW: 53388.2 Da PI: 9.2215

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW21501	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	18.5	5.6e-06	58	80	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C++C++ F r nL+ H r+H OIW21501 58 YVCEICNQGFQRDQNLQMHRRRH 80 9*********************9 PP
2	zf-C2H2	14.4	0.00011	135	157	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C+k + +s++k H++t+ OIW21501 135 WVCERCSKGYAVQSDYKAHLKTC 157 58*******************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 476 aa Download sequence
MFANNLSPSS LPTSDPSFTC AENANSINKR KRRPAGTPDP DAEVVSLSPK TLLESDRYVC 60 EICNQGFQRD QNLQMHRRRH KVPWKLLKRE TPVVKKKVFV CPEPTCLHHD PCHALGDLVG 120 IKKHFRRKHS NHKQWVCERC SKGYAVQSDY KAHLKTCGTR GHSCDCGRVF SRVESFIEHQ 180 DACNMGKLRT EPHHLQLQQP PACLSRTASS PSPSSETNFS TCPNWPQGLI VIPKSTKEPT 240 LFNMNPTTST IAATAEASIS MKNNKLDPNL DLQLSTNTNT NTKTSNTYTI DVVAASLSPN 300 KREDHHHYQK HSTQLQLSIG SSDNNEKNGQ LNRNHHNSSP KESSNTCNEK QGMALLRVAM 360 AEKMYAEEAR KQAKKQIELA EQELTNAKRI RQQARVELDK AYALKEHAMK HINSTMLQIT 420 CHACKQKFPA RNTTSTILDH ETNNSLVLSY VSSAITIEGG EVENNNGKEL HGKSNN

Sequence ? help Back to Top

Protein Sequence Length: 476 aa Download sequence

MFANNLSPSS LPTSDPSFTC AENANSINKR KRRPAGTPDP DAEVVSLSPK TLLESDRYVC  60
EICNQGFQRD QNLQMHRRRH KVPWKLLKRE TPVVKKKVFV CPEPTCLHHD PCHALGDLVG  120
IKKHFRRKHS NHKQWVCERC SKGYAVQSDY KAHLKTCGTR GHSCDCGRVF SRVESFIEHQ  180
DACNMGKLRT EPHHLQLQQP PACLSRTASS PSPSSETNFS TCPNWPQGLI VIPKSTKEPT  240
LFNMNPTTST IAATAEASIS MKNNKLDPNL DLQLSTNTNT NTKTSNTYTI DVVAASLSPN  300
KREDHHHYQK HSTQLQLSIG SSDNNEKNGQ LNRNHHNSSP KESSNTCNEK QGMALLRVAM  360
AEKMYAEEAR KQAKKQIELA EQELTNAKRI RQQARVELDK AYALKEHAMK HINSTMLQIT  420
CHACKQKFPA RNTTSTILDH ETNNSLVLSY VSSAITIEGG EVENNNGKEL HGKSNN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	29	34	KRKRRP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G01940.1	1e-114	C2H2 family protein

Link Out ? help Back to Top
Ensembl	OIW21501