PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW21352

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

Trihelix

Protein Properties

Length: 993aa MW: 111160 Da PI: 7.7442

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW21352	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	26.4	1.9e-08	224	283	16	75
trihelix 16 emeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtses 75 ++e +++gk ++ + +ev+++++ +g++r +k+ kw+n+ ++++k+ e+e++++ ++ OIW21352 224 QTELGMSKGKTRADKDKEVAEFLQMHGVNRDAKTAGTKWDNMLGEFRKVYEWERGGERDQ 283 445566788999******************************************985443 PP

Sequence ? help Back to Top
Protein Sequence Length: 993 aa Download sequence
MGDKGDTTKK QQQKLQHQQT PQISSSPKAP HEEPIPDARP IHHHQSSPVV VVSGATPFIS 60 DIYASSGGAS SLPFEQKFEA LNPKRPRYSS STGQWKILPS PTQQKQTEMA MLPTEQSPSP 120 SSNPQQQPLQ SYTTAAATAS SSDTTASSPS HSPMPLVSGG SGQEGKNKQE GSENIHHHLR 180 KGKYVSPVWK ANEMLWLARA WKAQYQGGSE GSSSSERRDQ QQKQTELGMS KGKTRADKDK 240 EVAEFLQMHG VNRDAKTAGT KWDNMLGEFR KVYEWERGGE RDQIGKSYFR LSPHERKLHR 300 LPASFDEEVF EELSQFMGSR IRSSSHGTRA GSSFITGDDG RTRALPLPPP SRPYKEDDLP 360 LAARTKHLAI TSGGEALFHG CRGSLLGLES TLDIHAPSSL TCSYKELRRI GKIRMTWEES 420 VCLWAEEGEI QRGRVRLQGS SFLNADELTF FDDAMVPCPM ESFEEGPLKG FSVDRFVSGQ 480 QVKVFGRRKS SNSASTSGFT ERVQLPSKAP SIRSISTPDF RDPTEYYVDC LMRVSSQTLP 540 SIFELKQHLQ DPPPEDLRFP LRKDVYNDLP QGKEVFFTTS IQEPLDCRAI MYDIVGPIIR 600 TNPSTLTCAS RDSFIALWDD CINRLVSRFC PEEIVMIRKP TLGSADDNNN MLQDQWPNVT 660 GFVNNYCLWR GEEIDQLREG QYGPSSTIVG KLLWTYLDLP YILGYYAIGN VVTFCALSRS 720 TQDHGAITRT DLLEINLSSS SDRLKALVPC YRISVLLSLL SKRCTSLSNC KAFVYSDFER 780 VDYGNGIITE MTPNTCIRVF SDKRRWAQAK EVYEILDHRI PHAEFLFGAS ENDMSLVFKP 840 RGCRMKPSNC EQLVEALKYV TKALVALHDL SFMHRDMGWD KVMRRSDRDN EWFVCGFDKA 900 AGAPELNKYV TAARGGHAPE MERGLHGVKV DVWGVGYLIK TCGVAGVPKM LRELQNRCME 960 QNPEQRPTAA DCYHHLLQLQ SSLQAAAGGG VLM

Sequence ? help Back to Top

Protein Sequence Length: 993 aa Download sequence

MGDKGDTTKK QQQKLQHQQT PQISSSPKAP HEEPIPDARP IHHHQSSPVV VVSGATPFIS  60
DIYASSGGAS SLPFEQKFEA LNPKRPRYSS STGQWKILPS PTQQKQTEMA MLPTEQSPSP  120
SSNPQQQPLQ SYTTAAATAS SSDTTASSPS HSPMPLVSGG SGQEGKNKQE GSENIHHHLR  180
KGKYVSPVWK ANEMLWLARA WKAQYQGGSE GSSSSERRDQ QQKQTELGMS KGKTRADKDK  240
EVAEFLQMHG VNRDAKTAGT KWDNMLGEFR KVYEWERGGE RDQIGKSYFR LSPHERKLHR  300
LPASFDEEVF EELSQFMGSR IRSSSHGTRA GSSFITGDDG RTRALPLPPP SRPYKEDDLP  360
LAARTKHLAI TSGGEALFHG CRGSLLGLES TLDIHAPSSL TCSYKELRRI GKIRMTWEES  420
VCLWAEEGEI QRGRVRLQGS SFLNADELTF FDDAMVPCPM ESFEEGPLKG FSVDRFVSGQ  480
QVKVFGRRKS SNSASTSGFT ERVQLPSKAP SIRSISTPDF RDPTEYYVDC LMRVSSQTLP  540
SIFELKQHLQ DPPPEDLRFP LRKDVYNDLP QGKEVFFTTS IQEPLDCRAI MYDIVGPIIR  600
TNPSTLTCAS RDSFIALWDD CINRLVSRFC PEEIVMIRKP TLGSADDNNN MLQDQWPNVT  660
GFVNNYCLWR GEEIDQLREG QYGPSSTIVG KLLWTYLDLP YILGYYAIGN VVTFCALSRS  720
TQDHGAITRT DLLEINLSSS SDRLKALVPC YRISVLLSLL SKRCTSLSNC KAFVYSDFER  780
VDYGNGIITE MTPNTCIRVF SDKRRWAQAK EVYEILDHRI PHAEFLFGAS ENDMSLVFKP  840
RGCRMKPSNC EQLVEALKYV TKALVALHDL SFMHRDMGWD KVMRRSDRDN EWFVCGFDKA  900
AGAPELNKYV TAARGGHAPE MERGLHGVKV DVWGVGYLIK TCGVAGVPKM LRELQNRCME  960
QNPEQRPTAA DCYHHLLQLQ SSLQAAAGGG VLM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33550.1	8e-07	Trihelix family protein

Link Out ? help Back to Top
Ensembl	OIW21352