PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW21306

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

Trihelix

Protein Properties

Length: 363aa MW: 40527.9 Da PI: 9.8119

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW21306	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	52.1	1.7e-16	51	153	2	83
trihelix 2 WtkqevlaLiearremeerlrrgk.....................lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpy 81 Wt qe+l Li+a++ ++er + + +W++v ++++++g+ rs++qC++kw+nl ++ykk+++ e+k e ss+ + OIW21306 51 WTIQETLILITAKKLDDERRLKVTatsnsstpsssssisacgsrnTGELRWKWVENYCWSHGCLRSQNQCNDKWDNLLRDYKKVRDYESKILLEYSSSNSS 151 ***********94444443321233445566666777777776999***************************************995444444444 PP trihelix 82 fd 83 + OIW21306 152 YW 153 44 PP

Sequence ? help Back to Top
Protein Sequence Length: 363 aa Download sequence
MSDPSTTPLP PPPTLPAQPH HHQPPLIQGV ATAPTSSSTP LIIREYRKGN WTIQETLILI 60 TAKKLDDERR LKVTATSNSS TPSSSSSISA CGSRNTGELR WKWVENYCWS HGCLRSQNQC 120 NDKWDNLLRD YKKVRDYESK ILLEYSSSNS SYWTLNKQQR KEQNLPSNMI FEVYQAISEV 180 LQRKQTQRII TTTTITTPLS QPQPIVTIAT PPPPPLQAMQ LSQPPPPPPP PPPPLPLPQQ 240 QPPPPPQVPA GSTTPAVSEK SQSSKSTEQS DGDGSESKRR KIRNLGSSIM KSATVLARAL 300 RTCEEEKEKR HREMMELEKR RIQMEEARNE VHRQGIATLV AAVTDLSGAI QSLINSDQPH 360 GQR

Sequence ? help Back to Top

Protein Sequence Length: 363 aa Download sequence

MSDPSTTPLP PPPTLPAQPH HHQPPLIQGV ATAPTSSSTP LIIREYRKGN WTIQETLILI  60
TAKKLDDERR LKVTATSNSS TPSSSSSISA CGSRNTGELR WKWVENYCWS HGCLRSQNQC  120
NDKWDNLLRD YKKVRDYESK ILLEYSSSNS SYWTLNKQQR KEQNLPSNMI FEVYQAISEV  180
LQRKQTQRII TTTTITTPLS QPQPIVTIAT PPPPPLQAMQ LSQPPPPPPP PPPPLPLPQQ  240
QPPPPPQVPA GSTTPAVSEK SQSSKSTEQS DGDGSESKRR KIRNLGSSIM KSATVLARAL  300
RTCEEEKEKR HREMMELEKR RIQMEEARNE VHRQGIATLV AAVTDLSGAI QSLINSDQPH  360
GQR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35640.1	7e-49	Trihelix family protein

Link Out ? help Back to Top
Ensembl	OIW21306