PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

OIW20636

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

Trihelix

Protein Properties

Length: 483aa MW: 54449.6 Da PI: 7.0284

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW20636	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	71.6	1.4e-22	104	205	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgk...............lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr.tsessstcpyfdql 85 +Wt+ +v++L+ a+ +++++ + ++ +kk++W++vs++m e+gf +sp+qC++k+++lnkryk+++++ +k+ +++++++ ++d + OIW20636 104 KWTDTMVRLLVMAVYYIGDECGGSEstdpngkkksnggllQKKGKWKSVSRAMLEKGFYVSPQQCEDKFNDLNKRYKRVNDILGKGtACRVVENQNLLDTM 204 7************9999999765667788889999999******************************************559***9999999 PP trihelix 86 e 86 e OIW20636 205 E 205 7 PP

Sequence ? help Back to Top
Protein Sequence Length: 483 aa Download sequence
MTTAGLLGVE NPLQQQQQNL TNPQNSHLLV HPQMVSYANS HQGNEQQHQN QSMKNGYPPF 60 AAKKQQSTTT MSDEDEPGVG VAADDNNNNS PKRKASSSPW QRMKWTDTMV RLLVMAVYYI 120 GDECGGSEST DPNGKKKSNG GLLQKKGKWK SVSRAMLEKG FYVSPQQCED KFNDLNKRYK 180 RVNDILGKGT ACRVVENQNL LDTMELAPKL KEEVRKLLNS KHLFFREMCA YHNSCGNGGG 240 CGDNLPQQQV EVGIEPSQSA QQKRGCPHSS ENVGVPFGGT GQEGMRMLKV GNGKENYEDD 300 HDHDDDNDDD SDDGSKDVSD EDGNESGDGG SRGHHGQEDE DENDKRPLRK KPRIASGLGL 360 GLRLGSGLGL GFSSQSQLMQ QLNNEVTNVF QDGGRGPWEK KHWMRLRILQ LEEQQIKYHS 420 EAFELEKQRL KWARFSSKKE RDMERAKLEN ERRKLENERM VLLIKQKELE LVKLLRQQQH 480 SLS

Sequence ? help Back to Top

Protein Sequence Length: 483 aa Download sequence

MTTAGLLGVE NPLQQQQQNL TNPQNSHLLV HPQMVSYANS HQGNEQQHQN QSMKNGYPPF  60
AAKKQQSTTT MSDEDEPGVG VAADDNNNNS PKRKASSSPW QRMKWTDTMV RLLVMAVYYI  120
GDECGGSEST DPNGKKKSNG GLLQKKGKWK SVSRAMLEKG FYVSPQQCED KFNDLNKRYK  180
RVNDILGKGT ACRVVENQNL LDTMELAPKL KEEVRKLLNS KHLFFREMCA YHNSCGNGGG  240
CGDNLPQQQV EVGIEPSQSA QQKRGCPHSS ENVGVPFGGT GQEGMRMLKV GNGKENYEDD  300
HDHDDDNDDD SDDGSKDVSD EDGNESGDGG SRGHHGQEDE DENDKRPLRK KPRIASGLGL  360
GLRLGSGLGL GFSSQSQLMQ QLNNEVTNVF QDGGRGPWEK KHWMRLRILQ LEEQQIKYHS  420
EAFELEKQRL KWARFSSKKE RDMERAKLEN ERRKLENERM VLLIKQKELE LVKLLRQQQH  480
SLS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10040.1	2e-65	Trihelix family protein

Link Out ? help Back to Top
Ensembl	OIW20636