PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

OIW20485

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

bHLH

Protein Properties

Length: 212aa MW: 24299.7 Da PI: 8.4809

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW20485	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	18.8	2.9e-06	71	116	5	55
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h ++Er RR+r +++ L ++lP+ +K++ ++++ A + I+ Lq OIW20485 71 HMINERMRRQRQRECCLALHSILPHG-----TKNDTNSVVQVARKEIQRLQ 116 889**********************7.....68888888888888888887 PP

Sequence ? help Back to Top
Protein Sequence Length: 212 aa Download sequence
MKGEEAFPPS NQSAFSQYRD QPRICLRAES SLNGSSSQNM NKRMIAFLKK KGLTVERNKV 60 AECEKERCFR HMINERMRRQ RQRECCLALH SILPHGTKND TNSVVQVARK EIQRLQGYKE 120 ELQGKIESNI ETIERNKVGG SKVQYLRVAY PECGIDSVIE TLNCLKGFGV DTRSIKSNFS 180 KEELFAVLEI EETKIIDVDQ VDGVIQRTLD EV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G43650.1	7e-26	bHLH family protein

Link Out ? help Back to Top
Ensembl	OIW20485