PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIW20400
Organism
Lupinus angustifolius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
Family HD-ZIP
Protein Properties Length: 274aa    MW: 31481.4 Da    PI: 4.4293
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIW20400genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox58.31.3e-182174356
              --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
  Homeobox  3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
              k+++++ +q+++Le+ Fe ++++  +++ +LA++lgL+ rqV vWFqNrRa++k
  OIW20400 21 KKRRLSVDQVKALEKNFEVENKLEPDRKVKLAQELGLQPRQVAVWFQNRRARYK 74
              566899***********************************************9 PP
2HD-ZIP_I/II128.62.5e-4120112193
  HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 
                  ekkrrls +qvk+LE++Fe e+kLep+rKv+la+eLglqprqvavWFqnrRAR+ktkqlE+dy +Lk++ydal+ + ++L++++e+L +e+ke
     OIW20400  20 EKKRRLSVDQVKALEKNFEVENKLEPDRKVKLAQELGLQPRQVAVWFQNRRARYKTKQLERDYGVLKANYDALRLNYDTLQRDNEALLKEIKE 112
                  69**************************************************************************************99987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 274 aa     Download sequence    
MLEGLDEEGC SNEETGHHSE KKRRLSVDQV KALEKNFEVE NKLEPDRKVK LAQELGLQPR  60
QVAVWFQNRR ARYKTKQLER DYGVLKANYD ALRLNYDTLQ RDNEALLKEI KELKSRMQEE  120
NTESDASVKE EMITLQQDSS EDLKYDYFNN SDGVEAGSLF PTDFNKDGSS DSDSSAILNE  180
EQNNNSPNYN KAISSSGVLQ SHNLLMTPSL KFNNCSSSTA PSSMNCFQFQ KSNSYQAQYV  240
KMEEHDFFSA DEACNFFSDE QAPTLQWYSS EEWS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12150KKRRLSVDQVKALEKNFEVENKLEPDRKVK
26977RRARYKTKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G40060.13e-69HD-ZIP family protein