PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW19928

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

bHLH

Protein Properties

Length: 340aa MW: 38418.3 Da PI: 9.7305

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW19928	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	28.1	3.6e-09	165	212	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-.STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskK.lsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + K Ka +L + ++Y++sLq OIW19928 165 SHSLAERVRREKISERMKMLQRLVPGC-----DKlTGKALMLDEIINYVQSLQ 212 8***********************9.....46499*************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 340 aa Download sequence
MAAFSYQYVP FLVDSSSFFP NINTGLPNSQ FHLHQKTSFD VTNHEISSLD QSSKITITDN 60 EPSVTKNISP QSSMVVDKLE TGEQVTQKMT PMVKKRRIRS VSSLSNPQSK DTTEGKNKRQ 120 RKSNNGGVKG EVKPKAVKKD QKKSSEEPPK GYIHVRARRG QATDSHSLAE RVRREKISER 180 MKMLQRLVPG CDKLTGKALM LDEIINYVQS LQNQVEFLSM KLASANPMFY DMATDLDTLL 240 VRPEKLNNIA SQSPLQSVQQ CNSTNQVTSF SNTTNTMIHT TISPTPNTEY LLDNSTSVFL 300 QGQKPNVLFE DIGSHFWEAE DQRQKFLHPY GFSNNFCSFH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	116	121	KNKRQR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G50915.2	6e-58	bHLH family protein

Link Out ? help Back to Top
Ensembl	OIW19928