PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW19852

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

AP2

Protein Properties

Length: 348aa MW: 40289.6 Da PI: 6.3202

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW19852	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	38.4	3e-12	50	106	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d ++n ++k+ + g ++ +e Aa a++ a++k++g OIW19852 50 SIYRGVTRHRWTGRYEAHLWDkNCWNEsQNKKGRQGAYDDEETAAHAYDLAALKYWG 106 57*****************99998898888888******************98 PP
2	AP2	51.3	2.9e-16	149	200	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV +++ +grW+A+I + g +k+ +lg++ t eeAa a++ a+ +++g OIW19852 149 SKYRGVARHHHNGRWEARIGRvF---G-NKYLYLGTYATQEEAATAYDIAAIEYRG 200 89**99******99966...3.6***********************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 348 aa Download sequence
MAKLSQQQPQ KNNASNDNNN KNLNATKNLT TKVKRTRRSV PRDSPPQRSS IYRGVTRHRW 60 TGRYEAHLWD KNCWNESQNK KGRQGAYDDE ETAAHAYDLA ALKYWGQETT LNFPLPTYEN 120 EVREMDDISR EEYIGSLRRK SSGFSRGISK YRGVARHHHN GRWEARIGRV FGNKYLYLGT 180 YATQEEAATA YDIAAIEYRG LNAITNFDLS HYINWLKPNN NDTNIIKYNI VDSNPIVCDR 240 NITPYPNQEM GCNFFNNQEK SFKNGEDQTT MTQTRLADAA STLGLLMTSN STLLESELLS 300 CIFPDEIQTY FDCEDYSKYG ESDDLMFNEL ESYLPPIFHF DDFDICLK

Sequence ? help Back to Top

Protein Sequence Length: 348 aa Download sequence

MAKLSQQQPQ KNNASNDNNN KNLNATKNLT TKVKRTRRSV PRDSPPQRSS IYRGVTRHRW  60
TGRYEAHLWD KNCWNESQNK KGRQGAYDDE ETAAHAYDLA ALKYWGQETT LNFPLPTYEN  120
EVREMDDISR EEYIGSLRRK SSGFSRGISK YRGVARHHHN GRWEARIGRV FGNKYLYLGT  180
YATQEEAATA YDIAAIEYRG LNAITNFDLS HYINWLKPNN NDTNIIKYNI VDSNPIVCDR  240
NITPYPNQEM GCNFFNNQEK SFKNGEDQTT MTQTRLADAA STLGLLMTSN STLLESELLS  300
CIFPDEIQTY FDCEDYSKYG ESDDLMFNEL ESYLPPIFHF DDFDICLK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G16060.1	2e-96	AP2 family protein

Link Out ? help Back to Top
Ensembl	OIW19852