PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

OIW19659

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

C2H2

Protein Properties

Length: 581aa MW: 66526.9 Da PI: 4.8145

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW19659	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.1	0.0013	298	319	1	22
EEETTTTEEESSHHHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirt 22 + C Cgk F++ + k+H ++ OIW19659 298 FYCVLCGKKFKSEKQWKNHEQS 319 78*****************876 PP

Sequence ? help Back to Top
Protein Sequence Length: 581 aa Download sequence
MAASTKRCHY EVLAVSRDSS PDEIRSAYRR LALQRHPDKL VQSGISQSEA TAQFQELQHA 60 YEVLSDPKER AWYDSHRSQI LFSDTDSVGS SVVPDLFSFF SNTVYNGYSD SGKGFYKVYS 120 DVFDKIHANE INFAKKMGIG VDSVRQAPVM GNLESPYAQV TAFYSYWIGF ATVMDFCWVD 180 EYDVMAGPDR RTRRRMEEEN NKARRKARKE YNDTVRKLAD FVKKRDKRVI DMKVKKNAEM 240 EKKKEEEREM KRRLEKEKKE RAMKYEEPDW AKVNEDEVDD WVEELEEEEE EKKEEKEFYC 300 VLCGKKFKSE KQWKNHEQSK KHKEKVAEFR DSLDDDIEEQ VEEDLEVEVE VEGLESEVNG 360 IGANDVRSGD DDDYGVDDLE GRVRDGLNVA EEKTRNGVEL DDDGSGGLFD SKEGEEAGVS 420 VDLDGDEEID VLEAMVAGHN SRKPSASTQE PEASVDTTHI ENENDEVFVM EYDNRKGTRK 480 KRGSKKERGR KNWEESNAPA NGDHGNMDNK GNDNSYAEES TSQHYGENEG NSKGNEPVGK 540 HKKVSSELAD KKGNAKDTKT KAKSSSKGRK GKVRNHEIFS Y

Sequence ? help Back to Top

Protein Sequence Length: 581 aa Download sequence

MAASTKRCHY EVLAVSRDSS PDEIRSAYRR LALQRHPDKL VQSGISQSEA TAQFQELQHA  60
YEVLSDPKER AWYDSHRSQI LFSDTDSVGS SVVPDLFSFF SNTVYNGYSD SGKGFYKVYS  120
DVFDKIHANE INFAKKMGIG VDSVRQAPVM GNLESPYAQV TAFYSYWIGF ATVMDFCWVD  180
EYDVMAGPDR RTRRRMEEEN NKARRKARKE YNDTVRKLAD FVKKRDKRVI DMKVKKNAEM  240
EKKKEEEREM KRRLEKEKKE RAMKYEEPDW AKVNEDEVDD WVEELEEEEE EKKEEKEFYC  300
VLCGKKFKSE KQWKNHEQSK KHKEKVAEFR DSLDDDIEEQ VEEDLEVEVE VEGLESEVNG  360
IGANDVRSGD DDDYGVDDLE GRVRDGLNVA EEKTRNGVEL DDDGSGGLFD SKEGEEAGVS  420
VDLDGDEEID VLEAMVAGHN SRKPSASTQE PEASVDTTHI ENENDEVFVM EYDNRKGTRK  480
KRGSKKERGR KNWEESNAPA NGDHGNMDNK GNDNSYAEES TSQHYGENEG NSKGNEPVGK  540
HKKVSSELAD KKGNAKDTKT KAKSSSKGRK GKVRNHEIFS Y

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	190	227	RRTRRRMEEENNKARRKARKEYNDTVRKLADFVKKRDK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G74250.1	1e-141	C2H2 family protein

Link Out ? help Back to Top
Ensembl	OIW19659