PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIW19634
Organism
Lupinus angustifolius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
Family M-type_MADS
Protein Properties Length: 291aa    MW: 32643 Da    PI: 7.3548
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIW19634genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF732.4e-231053245
              ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSE CS
    SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgk 45
              + e++snrqvt+skR+ gilKKA+ELS+LCd+ +a+++fs+tgk
  OIW19634 10 KLESTSNRQVTYSKRKSGILKKAKELSILCDIPIALLMFSPTGK 53
              679***************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 291 aa     Download sequence    
MGRVKLKIKK LESTSNRQVT YSKRKSGILK KAKELSILCD IPIALLMFSP TGKPTLLQGE  60
RSYWSNLDKI NNLEHLRQME DSLRESINRV CLQKDNLGKH QLIPLNCANQ LQEGMNLPMM  120
MAGLQESQPL SWLLNNDNHH QLMLPNEPKF LAFSDNTNRD AECSTNISLP GYSGYNIGNG  180
KLEVGSSPQV TTLGHGGCAM NELNGTASLN VQHCEQFAYP PHPPDNEEMK HHHAINSKPN  240
TMDYQVHNNF DLPRSLFENG HQCWNSGSGP CGVAMYNENG FHRVSSTFLL D
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G03060.14e-36M-type_MADS family protein