PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIW19421
Organism
Lupinus angustifolius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
Family AP2
Protein Properties Length: 514aa    MW: 56181.4 Da    PI: 8.9064
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIW19421genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP236.71.1e-11156212155
       AP2   1 sgykGVrwdkkrgrWvAeIrd.pseng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 
               s y+GV++++++gr++A+++d  +     ++ k  + g ++ +e+Aa+a++ a++k++g
  OIW19421 156 SIYRGVTRHRWTGRYEAHLWDnSCR-RegQSrKGRQ-GGYDKEEKAARAYDLAALKYWG 212
               57*******************5444.2455536655.779999**************98 PP
2AP247.25.3e-15255306155
       AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
               s y+GV+++++ grW A+I  +     +k  +lg+f t eeAa+a++ a+ k++g
  OIW19421 255 SIYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 306
               57****************988532...5************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 514 aa     Download sequence    
MDSSKNSSSP LNTNFNNNNN SLAFSLSSHF PNHSSHLSLF HSFSYPTPTP LTITVNNNVE  60
ALPEVRSDGS VGGGTNLSIF SGGPKFEDFM GCSTTTTGAS APSQLHQFST ETDLYDSELK  120
TTIAACFPRG FGAEPTTEPQ KHSPKKTAET FGQRTSIYRG VTRHRWTGRY EAHLWDNSCR  180
REGQSRKGRQ GGYDKEEKAA RAYDLAALKY WGPTTTTNFP ISNYEKELED MKNMTRQEFV  240
ASLRRKSSGF SRGASIYRGV TRHHQHGRWQ ARIGRVAGNK DLYLGTFSTQ EEAAEAYDIA  300
AIKFRGLNAV TNFDMSRYDV KNIANSTLPI GGLSSKNKNS SNSVSDQSKS HSDERDPSNS  360
ASSVSFASQQ HQLQSNSTLT FAIPIKQDHS DYWSVLGYHN NTTSVTTTPT SFASSNNGTP  420
FNMDFSAAPS NDTNNAAAFL NGSSGSIFVQ NQKHSGGSSN SSSIPLAMPM FSLNSNSGYE  480
NSSAGYGNWI GPTLHTFQTH AKPSLFQTPI FGME
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57390.11e-131AP2 family protein