PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW19360

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

GRF

Protein Properties

Length: 394aa MW: 45034.4 Da PI: 7.4635

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW19360	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	77.7	1.1e-24	91	134	1	44
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 d+epgrCrRtDGKkWRCs+++++++k+CErH+hrg++rsrk++e OIW19360 91 DPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVE 134 79***************************************987 PP
2	QLQ	39.6	1.6e-14	29	57	8	36
QLQ 8 lqlLksQilAyKyLaanqPvPpeLlqaiq 36 +q+L++Q+l+yK++a+++ +Pp+L++ i+ OIW19360 29 WQELEHQALIYKHMASGVSIPPDLIFTIK 57 9***********************99887 PP

Sequence ? help Back to Top
Protein Sequence Length: 394 aa Download sequence
MDFRKDVRDN SCQCSSLFAE AVAASNREWQ ELEHQALIYK HMASGVSIPP DLIFTIKRSY 60 LDSPLSSRLL PHQPQHFGWN YLQMGLGRKI DPEPGRCRRT DGKKWRCSKE AYPDSKYCER 120 HMHRGKNRSR KPVEVLKTTN DTNASSTSTT TTPSSILSIT KNNTALTPTT THDSYHHHPH 180 QHSSSSYAAS HPQQHSFLYH HPPPSRPSSN GLSFQDNNSA SMFLDNASCS QNNESRNRYI 240 YGLKEEVDEH AFFTEPSGNM RSFSASSMDD SWNLTPLTIS SSSSSKQRNF SGLTNDNEYS 300 YLQLQSLSDN AKQQSEQDQG CYNDMKCENI MKLGDREEQQ PQQKTVHRFF DEWPPKRRGL 360 WLDLDDKSST TQLSISIPTS NDFANFSSRN QRDD

Sequence ? help Back to Top

Protein Sequence Length: 394 aa Download sequence

MDFRKDVRDN SCQCSSLFAE AVAASNREWQ ELEHQALIYK HMASGVSIPP DLIFTIKRSY  60
LDSPLSSRLL PHQPQHFGWN YLQMGLGRKI DPEPGRCRRT DGKKWRCSKE AYPDSKYCER  120
HMHRGKNRSR KPVEVLKTTN DTNASSTSTT TTPSSILSIT KNNTALTPTT THDSYHHHPH  180
QHSSSSYAAS HPQQHSFLYH HPPPSRPSSN GLSFQDNNSA SMFLDNASCS QNNESRNRYI  240
YGLKEEVDEH AFFTEPSGNM RSFSASSMDD SWNLTPLTIS SSSSSKQRNF SGLTNDNEYS  300
YLQLQSLSDN AKQQSEQDQG CYNDMKCENI MKLGDREEQQ PQQKTVHRFF DEWPPKRRGL  360
WLDLDDKSST TQLSISIPTS NDFANFSSRN QRDD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13960.1	1e-51	GRF family protein

Link Out ? help Back to Top
Ensembl	OIW19360