PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

OIW19253

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

HSF

Protein Properties

Length: 386aa MW: 44320.5 Da PI: 5.3269

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW19253	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	111	8.6e-35	14	105	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 Fl k+ye+++d++ ++++sws+n++sf+v+++ ef++++Lpk+Fkh+nf+SF+RQLn+YgF+kv+ e+ weF++++F +g+ +++++i+ OIW19253 14 FLAKTYEMVDDPSSDSIVSWSANSKSFIVWNPLEFSRDLLPKFFKHNNFSSFIRQLNTYGFRKVDPEQ---------WEFANDYFVRGQPHHMKNIH 101 9*************************************************************9998.........****************** PP XXXX CS HSF_DNA-bind 99 rkks 102 r+k OIW19253 102 RRKP 105 *985 PP

Sequence ? help Back to Top
Protein Sequence Length: 386 aa Download sequence
MDEAQGIPGS LPPFLAKTYE MVDDPSSDSI VSWSANSKSF IVWNPLEFSR DLLPKFFKHN 60 NFSSFIRQLN TYGFRKVDPE QWEFANDYFV RGQPHHMKNI HRRKPVHSHS LQNLQTHVPL 120 MESERQSLKN EIDKLKQDKE LLLMELRRYE HELQTYEIQL HCSKDHLGKL EQAQQKMVSF 180 VSEVLQKPGN ALNLLSLTES VDRKRRVPRS SYFSDEASME DAVETSRIRE NAESTSSLAL 240 NMERLDQLES SLVVWENIAH VVGDTFVHVH SNMDIDESTI CAVSPSISSE KLDVEVQPKP 300 SGIDMNSEPV ALKEQSARTT IVTTGVNDVF WEQFLTENPG SSEAQEVQSE RKDYDGRKNE 360 GKFWWNTRIT NSLPEQIGHV GQAEKT

Sequence ? help Back to Top

Protein Sequence Length: 386 aa Download sequence

MDEAQGIPGS LPPFLAKTYE MVDDPSSDSI VSWSANSKSF IVWNPLEFSR DLLPKFFKHN  60
NFSSFIRQLN TYGFRKVDPE QWEFANDYFV RGQPHHMKNI HRRKPVHSHS LQNLQTHVPL  120
MESERQSLKN EIDKLKQDKE LLLMELRRYE HELQTYEIQL HCSKDHLGKL EQAQQKMVSF  180
VSEVLQKPGN ALNLLSLTES VDRKRRVPRS SYFSDEASME DAVETSRIRE NAESTSSLAL  240
NMERLDQLES SLVVWENIAH VVGDTFVHVH SNMDIDESTI CAVSPSISSE KLDVEVQPKP  300
SGIDMNSEPV ALKEQSARTT IVTTGVNDVF WEQFLTENPG SSEAQEVQSE RKDYDGRKNE  360
GKFWWNTRIT NSLPEQIGHV GQAEKT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18880.1	1e-125	HSF family protein

Link Out ? help Back to Top
Ensembl	OIW19253