PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Link Out |

Basic Information? help Back to Top

TF ID

OIW19120

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

LBD

Protein Properties

Length: 229aa MW: 25078.6 Da PI: 8.0962

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW19120	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	100.1	2.1e-31	2	103	1	97
DUF260 1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelal 96 +C++C+vlr++C+++C+l+p++ p++q +++ +v+k+FG++ +++++++++e++r+++++sl++eA+ r+ +Pv+Gavg++++++++++q+++e++l OIW19120 2 SCNGCRVLRKGCSESCILRPCLqwietPEAQGHATVFVAKFFGRAGLMSFISNVSETQRPALFRSLLFEACGRTVNPVNGAVGLLWNGNWHVCQAAVETVL 102 6***********************************************************************************************99987 PP DUF260 97 l 97 + OIW19120 103 R 103 6 PP

Sequence ? help Back to Top
Protein Sequence Length: 229 aa Download sequence
MSCNGCRVLR KGCSESCILR PCLQWIETPE AQGHATVFVA KFFGRAGLMS FISNVSETQR 60 PALFRSLLFE ACGRTVNPVN GAVGLLWNGN WHVCQAAVET VLRGGTLTPM AEVIRMDAHA 120 PAMDEASESE VTCTDISRIR DPNLNYRFMS SRSNCGGGGG KRKRPEAAAA DLDLRLTPIF 180 MQKVSDYWSR LENRRQGSPS MTSEESVTTV ACLESGTHGG DRKVLNLFI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37540.1	3e-82	LBD family protein

Link Out ? help Back to Top
Ensembl	OIW19120