PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

OIW18548

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

C2H2

Protein Properties

Length: 471aa MW: 53056.8 Da PI: 4.9085

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW18548	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.6	0.00087	159	175	1	17
EEETTTTEEESSHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLk 17 y CpdCg++++ + L+ OIW18548 159 YICPDCGRRYNALDALR 175 89********9998885 PP

Sequence ? help Back to Top
Protein Sequence Length: 471 aa Download sequence
MTDHYNKLVK LAARAFYDDL PAKSENQPKT GRSDNRGIAV VILDALTRRQ WVREEDLAKD 60 LKLHTKQLRR TLRFFEEEKI IAREYRRETA KGAKIYSAAV AATADGQTAK EGEEKVKLHT 120 HSYCCLDYAQ IYDVVRYRLH RMKHKLKDEL ENKNTIQEYI CPDCGRRYNA LDALRLISFE 180 DEDFHCENCN GRLEIESDKI AAQEGGDGDD NARRRRREKL KDMLQKMEIQ LKPLVDQLSR 240 VKDLPVPEFG TLQSWEALAS AAGRAANGDN AGDSRNSHLG YNGAPMPYSG DTKVVVDFNG 300 TEGKGEGIKS ETDGKPVKVL PPWMIRSGMV LTEEQRGEVK QETKMDGTST SSTAQYTEDK 360 KSKVEHADNT NIQDEYIKAY YAALLKQQHE LAEAAKKEEF SNSQTADDPS SSISIRQVGM 420 KTKREEDDDG TEWEDAPIGG NGNGSYKAVD LNVEADEAAA DDDDDIDWEE G

Sequence ? help Back to Top

Protein Sequence Length: 471 aa Download sequence

MTDHYNKLVK LAARAFYDDL PAKSENQPKT GRSDNRGIAV VILDALTRRQ WVREEDLAKD  60
LKLHTKQLRR TLRFFEEEKI IAREYRRETA KGAKIYSAAV AATADGQTAK EGEEKVKLHT  120
HSYCCLDYAQ IYDVVRYRLH RMKHKLKDEL ENKNTIQEYI CPDCGRRYNA LDALRLISFE  180
DEDFHCENCN GRLEIESDKI AAQEGGDGDD NARRRRREKL KDMLQKMEIQ LKPLVDQLSR  240
VKDLPVPEFG TLQSWEALAS AAGRAANGDN AGDSRNSHLG YNGAPMPYSG DTKVVVDFNG  300
TEGKGEGIKS ETDGKPVKVL PPWMIRSGMV LTEEQRGEVK QETKMDGTST SSTAQYTEDK  360
KSKVEHADNT NIQDEYIKAY YAALLKQQHE LAEAAKKEEF SNSQTADDPS SSISIRQVGM  420
KTKREEDDDG TEWEDAPIGG NGNGSYKAVD LNVEADEAAA DDDDDIDWEE G

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	213	219	RRRRREK
2	214	220	RRRRREK

Link Out ? help Back to Top
Ensembl	OIW18548