PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

OIW18538

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

bHLH

Protein Properties

Length: 562aa MW: 62483.4 Da PI: 8.2563

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW18538	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	54.8	1.7e-17	262	311	2	55
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r +h++ E+rRR++iN++f+ Lrel+P++ ++K +Ka+ L +++eYI+ Lq OIW18538 262 RSKHSATEQRRRSKINDRFQMLRELIPHS----DQKRDKASFLLEVIEYIHFLQ 311 889***********************9....9****************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 562 aa Download sequence
MELPHARVFE TQGRKPTHDF LSLYSNSTTQ QDSRPPSQVC TGSRLKTQDF LQPLERADTK 60 ASAKEEATDE ISSVAPKPPP PTPTSVEHLL PGGIGTYSIS HISNFNNNQR VPKPEASIFT 120 VHQANSTDRN DENSNCSSYT SSGFTLWEES AVKKGKTGKE NNVDVKPILV ESAAKPGQWT 180 SSERTSQSFS NNRHNSFNSC STSQTTGQKN QSFIEMMKSA EAGAQDEELE NEETFFLKKE 240 FQRELKVKVD GKSTEQKPNT PRSKHSATEQ RRRSKINDRF QMLRELIPHS DQKRDKASFL 300 LEVIEYIHFL QDKVHKHEGS FQEWNHESEK LVPWRNNARQ AESFETRAKN SGLGPSPTSL 360 FASKTDLKNI TISQTIPGST QHVESGLNIS TNFKRMDHHP GITNNAFPIP ISPQPNFFIP 420 AQSGGRGGVV SQLAHGLTSD AENGIYQHSE EYQTMATTSE KLKEKEPTIE GSAISKSHAY 480 SKGLLDTLTH ALHSSGVDLS QTSISVQIEL GKQTNIRPIV PMSMCGAKGE EVPSNSERMM 540 RSRVASSEKS DQPVKKLKTC RT

Sequence ? help Back to Top

Protein Sequence Length: 562 aa Download sequence

MELPHARVFE TQGRKPTHDF LSLYSNSTTQ QDSRPPSQVC TGSRLKTQDF LQPLERADTK  60
ASAKEEATDE ISSVAPKPPP PTPTSVEHLL PGGIGTYSIS HISNFNNNQR VPKPEASIFT  120
VHQANSTDRN DENSNCSSYT SSGFTLWEES AVKKGKTGKE NNVDVKPILV ESAAKPGQWT  180
SSERTSQSFS NNRHNSFNSC STSQTTGQKN QSFIEMMKSA EAGAQDEELE NEETFFLKKE  240
FQRELKVKVD GKSTEQKPNT PRSKHSATEQ RRRSKINDRF QMLRELIPHS DQKRDKASFL  300
LEVIEYIHFL QDKVHKHEGS FQEWNHESEK LVPWRNNARQ AESFETRAKN SGLGPSPTSL  360
FASKTDLKNI TISQTIPGST QHVESGLNIS TNFKRMDHHP GITNNAFPIP ISPQPNFFIP  420
AQSGGRGGVV SQLAHGLTSD AENGIYQHSE EYQTMATTSE KLKEKEPTIE GSAISKSHAY  480
SKGLLDTLTH ALHSSGVDLS QTSISVQIEL GKQTNIRPIV PMSMCGAKGE EVPSNSERMM  540
RSRVASSEKS DQPVKKLKTC RT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G08130.2	1e-105	bHLH family protein

Link Out ? help Back to Top
Ensembl	OIW18538