PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

OIW18400

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

GATA

Protein Properties

Length: 633aa MW: 70039 Da PI: 6.6697

Description

GATA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW18400	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GATA	53.9	2.4e-17	530	563	1	34
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 C+ Cgt+kTplWR gp g+k+LCnaCG++ rk++ OIW18400 530 CTDCGTSKTPLWRGGPAGPKSLCNACGIRSRKRK 563 ********************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 633 aa Download sequence
MSLRPNERTD GRRNRYKVAV DADEGRRRRE DNLVEIRKNK REESLQKKRR EGFAAQQQFA 60 TPLNNADRKL ETLPAMVAAV WSDDNNIQLE TTTQFRKLLS IERSPPIEEV IQSGVVPRFV 120 QFLGREDFHQ LQFEAAWALT NIASGTSENT KVVIDHGAVP IFVQLLSSHS DDVREQAVWA 180 LGNVAGDSPK CRDLVLGLGA LIPLLAQLNE HAKLSMLRNA TWTLSNFCRG KPQPPFEQVR 240 PAIPALERLV FSSDEEVLTD ACWALSYLSD GTNDKIQAVI EAGVCTRLVQ LLMHPSPSVL 300 IPALRTVGNI VTGDDMQTQC IINHGALPIL LSLLTHNHKK SIKKEACWTI SNITAGNKEQ 360 IQAVIEAGLI APLVVLLQNA EFDIKKEAAW AISNATSGGS HEQIKYLVSQ GCIKPLCELL 420 ICPDPRIITV SLEGLENILK VGDAEKNLGN TGDVNLYAQM IDDAEGLEKI ENLQSHDNNE 480 IYEKAVKILE TYWLEDEDEE TLPPGDDSQP GFKFGSNEGS EAVTEPKKTC TDCGTSKTPL 540 WRGGPAGPKS LCNACGIRSR KRKRAILGLS KSNSDVIRKG KRSNNKIGGS LKQRLWNLGK 600 EVMMQRSTMM KKFGEEEQAA VVLMCLSYGS VYA

Sequence ? help Back to Top

Protein Sequence Length: 633 aa Download sequence

MSLRPNERTD GRRNRYKVAV DADEGRRRRE DNLVEIRKNK REESLQKKRR EGFAAQQQFA  60
TPLNNADRKL ETLPAMVAAV WSDDNNIQLE TTTQFRKLLS IERSPPIEEV IQSGVVPRFV  120
QFLGREDFHQ LQFEAAWALT NIASGTSENT KVVIDHGAVP IFVQLLSSHS DDVREQAVWA  180
LGNVAGDSPK CRDLVLGLGA LIPLLAQLNE HAKLSMLRNA TWTLSNFCRG KPQPPFEQVR  240
PAIPALERLV FSSDEEVLTD ACWALSYLSD GTNDKIQAVI EAGVCTRLVQ LLMHPSPSVL  300
IPALRTVGNI VTGDDMQTQC IINHGALPIL LSLLTHNHKK SIKKEACWTI SNITAGNKEQ  360
IQAVIEAGLI APLVVLLQNA EFDIKKEAAW AISNATSGGS HEQIKYLVSQ GCIKPLCELL  420
ICPDPRIITV SLEGLENILK VGDAEKNLGN TGDVNLYAQM IDDAEGLEKI ENLQSHDNNE  480
IYEKAVKILE TYWLEDEDEE TLPPGDDSQP GFKFGSNEGS EAVTEPKKTC TDCGTSKTPL  540
WRGGPAGPKS LCNACGIRSR KRKRAILGLS KSNSDVIRKG KRSNNKIGGS LKQRLWNLGK  600
EVMMQRSTMM KKFGEEEQAA VVLMCLSYGS VYA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G06740.1	1e-40	GATA family protein

Link Out ? help Back to Top
Ensembl	OIW18400