PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

OIW18265

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

Trihelix

Protein Properties

Length: 347aa MW: 39452.9 Da PI: 6.542

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW18265	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	59.5	8.5e-19	48	136	1	80
trihelix 1 rWtkqevlaLiearremeerlr..rgk.......lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcp 80 rWt+qe+ +Liea++ +e+ + r k +W+ vs+ ++++g+ r+p+qC+++w nl ++++kik++e++ ++e +s + OIW18265 48 RWTRQETIVLIEAKKMVENGEQlcRFKsssglfnHTDLKWDMVSSCCQQQGVDRGPVQCRKRWGNLLTDFRKIKKWESSIKDEGESFWL 136 8************7777666432212334554999****************************************9887776664 PP

Sequence ? help Back to Top
Protein Sequence Length: 347 aa Download sequence
MTLNSEKIDE VVPLVSTDSP IATPVEKQPT TEVVDPKSER VKATRHPRWT RQETIVLIEA 60 KKMVENGEQL CRFKSSSGLF NHTDLKWDMV SSCCQQQGVD RGPVQCRKRW GNLLTDFRKI 120 KKWESSIKDE GESFWLMRND KRKENKLPGF FDEVVYRVLD GGLLMNASAL PLNLIKVAPK 180 PENGVDHVEG VGLLEEYKDD EDEEDEDIVD NSEKMSWSTE NIFETNIARN ILSSPMKTPA 240 SKGTFMRGSL KITPTLTLPN PGCQREPMSQ EGYKRRRLSP ENSEDTTDFS NNIIKVLRRN 300 NNIMKAYLGA QNMNHQLAIE QQKEQSKTLV IALGKLTDAL TKIADKL

Sequence ? help Back to Top

Protein Sequence Length: 347 aa Download sequence

MTLNSEKIDE VVPLVSTDSP IATPVEKQPT TEVVDPKSER VKATRHPRWT RQETIVLIEA  60
KKMVENGEQL CRFKSSSGLF NHTDLKWDMV SSCCQQQGVD RGPVQCRKRW GNLLTDFRKI  120
KKWESSIKDE GESFWLMRND KRKENKLPGF FDEVVYRVLD GGLLMNASAL PLNLIKVAPK  180
PENGVDHVEG VGLLEEYKDD EDEEDEDIVD NSEKMSWSTE NIFETNIARN ILSSPMKTPA  240
SKGTFMRGSL KITPTLTLPN PGCQREPMSQ EGYKRRRLSP ENSEDTTDFS NNIIKVLRRN  300
NNIMKAYLGA QNMNHQLAIE QQKEQSKTLV IALGKLTDAL TKIADKL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	274	278	KRRRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33550.1	4e-58	Trihelix family protein

Link Out ? help Back to Top
Ensembl	OIW18265