PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW18255

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

bHLH

Protein Properties

Length: 348aa MW: 39237.2 Da PI: 6.9971

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW18255	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	28.5	2.7e-09	174	221	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i ++++ L++l+P + +k Ka +L + ++Y++sLq OIW18255 174 SHSLAERVRREKISERMNMLQKLVPGC----DKVTGKALMLDEIINYVQSLQ 221 8***********************9....555***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 348 aa Download sequence
MAAFSYQYHP FLVDPAFIPN TPIIMSSLTH QKHAHINTTL PSYQSHLLQA NQETSCVDHS 60 SKVSISDTEP SFVIKDNCSP QCSMVVDKVE NGEQVNQKVA PMEKKRRIRN GSPLSVSQSK 120 DSREGRNKKQ KKNDDEVKEE DKPKKEKKVE KEGPEEPPKG YIHVRARRGQ ATDSHSLAER 180 VRREKISERM NMLQKLVPGC DKVTGKALML DEIINYVQSL QNQVEFLSMK LASVNPMFFN 240 LAIDLDLDTP MVLPEKLNSI VSPTPPLSSI PQCSLNQSSH FADTTTIATN NNTGFLAANE 300 YLLDYAFLQG QRSTFFSEYS GGQFWDVEDQ RQKFLNPYGF GNDSCSLN

Sequence ? help Back to Top

Protein Sequence Length: 348 aa Download sequence

MAAFSYQYHP FLVDPAFIPN TPIIMSSLTH QKHAHINTTL PSYQSHLLQA NQETSCVDHS  60
SKVSISDTEP SFVIKDNCSP QCSMVVDKVE NGEQVNQKVA PMEKKRRIRN GSPLSVSQSK  120
DSREGRNKKQ KKNDDEVKEE DKPKKEKKVE KEGPEEPPKG YIHVRARRGQ ATDSHSLAER  180
VRREKISERM NMLQKLVPGC DKVTGKALML DEIINYVQSL QNQVEFLSMK LASVNPMFFN  240
LAIDLDLDTP MVLPEKLNSI VSPTPPLSSI PQCSLNQSSH FADTTTIATN NNTGFLAANE  300
YLLDYAFLQG QRSTFFSEYS GGQFWDVEDQ RQKFLNPYGF GNDSCSLN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	104	131	KKRRIRNGSPLSVSQSKDSREGRNKKQK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G50915.2	2e-46	bHLH family protein

Link Out ? help Back to Top
Ensembl	OIW18255