PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

OIW17999

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

HSF

Protein Properties

Length: 486aa MW: 54311.1 Da PI: 5.8844

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW17999	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	109.7	2.1e-34	21	111	2	101
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 Fl+k+y++++d+++++++sws+++nsfvv+++ efa+ +Lp+yFkh+nf+SF+RQLn+YgF+k++ e+ weF+++ F k++k+ll++i OIW17999 21 FLMKTYDMVDDSTTDDIVSWSATNNSFVVWNSPEFARLLLPTYFKHNNFSSFIRQLNTYGFRKIHPER---------WEFANDDFLKDQKHLLKNIY 108 9******************999*************************************999.........****************** PP XXX CS HSF_DNA-bind 99 rkk 101 r+k OIW17999 109 RRK 111 *98 PP

Sequence ? help Back to Top
Protein Sequence Length: 486 aa Download sequence
MDGAPLSSSS AGTGGGGPAP FLMKTYDMVD DSTTDDIVSW SATNNSFVVW NSPEFARLLL 60 PTYFKHNNFS SFIRQLNTYG FRKIHPERWE FANDDFLKDQ KHLLKNIYRR KPIHSHSHPP 120 GTPVDPERAA LEEEIEKLSH EKASLESNIF SFKQHKSTAK VQLDDFHQRL DGIEKRQKKL 180 SNFFEKALQN PVFVEQISRK IESMDLSAYN KKRRLPQPDH LLPVAKSNFV ESYSNFRVEL 240 GNVFHQDFSN KLRLELSPAV SDMNLVSGST QSSTEDREIP QKKSSEGELK GVETTKALSF 300 APETLELADT GASFTFNMDS CLSRRAATAE SPNLHSLEPS SEEGDSHISC QLNLTLASST 360 LQVNRNSYSA RSPQIDCQEI GKLAESRLYG NGKESDNGIS SNRNPVNEVA NLASPHEAPS 420 NKQVTAAAPE RVNDVFWEQF LTERPGCSDN EEAVSSYRAN PYDEQDEGRS GHGISGNIKS 480 MDKLTL

Sequence ? help Back to Top

Protein Sequence Length: 486 aa Download sequence

MDGAPLSSSS AGTGGGGPAP FLMKTYDMVD DSTTDDIVSW SATNNSFVVW NSPEFARLLL  60
PTYFKHNNFS SFIRQLNTYG FRKIHPERWE FANDDFLKDQ KHLLKNIYRR KPIHSHSHPP  120
GTPVDPERAA LEEEIEKLSH EKASLESNIF SFKQHKSTAK VQLDDFHQRL DGIEKRQKKL  180
SNFFEKALQN PVFVEQISRK IESMDLSAYN KKRRLPQPDH LLPVAKSNFV ESYSNFRVEL  240
GNVFHQDFSN KLRLELSPAV SDMNLVSGST QSSTEDREIP QKKSSEGELK GVETTKALSF  300
APETLELADT GASFTFNMDS CLSRRAATAE SPNLHSLEPS SEEGDSHISC QLNLTLASST  360
LQVNRNSYSA RSPQIDCQEI GKLAESRLYG NGKESDNGIS SNRNPVNEVA NLASPHEAPS  420
NKQVTAAAPE RVNDVFWEQF LTERPGCSDN EEAVSSYRAN PYDEQDEGRS GHGISGNIKS  480
MDKLTL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G13980.1	1e-161	HSF family protein

Link Out ? help Back to Top
Ensembl	OIW17999