PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW17795

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

Trihelix

Protein Properties

Length: 352aa MW: 39603.6 Da PI: 5.948

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW17795	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	59.1	1.2e-18	49	136	1	79
trihelix 1 rWtkqevlaLiearremeerlrrgk.........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstc 79 rWt+qe+l+Liea++ +e+r + + p+W vs+ ++++g++r+p+qC+++w nl ++++k+k+ e++ +++ +s + OIW17795 49 RWTRQETLLLIEAKKMVENRDQLCNltpssillnHTDPKWNIVSSCVQQQGVKRGPIQCRKRWGNLLTDFRKVKKYESDMKDDGESFW 136 8**************9999964333445555599***************************************99877666555 PP

Sequence ? help Back to Top
Protein Sequence Length: 352 aa Download sequence
MASNSQKIAE AASTDSPTAT PVGKQSATTT TEVVGDPKSE RIKPTRYPRW TRQETLLLIE 60 AKKMVENRDQ LCNLTPSSIL LNHTDPKWNI VSSCVQQQGV KRGPIQCRKR WGNLLTDFRK 120 VKKYESDMKD DGESFWMMRS DKRKENKLPG FFDEVVYKVI DGDDLSGAAV PLALMKMASK 180 PESSAEHAEK VKLLGQSKDD EDGDEDEEDE TIADSEKMYW STEKNTFEAN SERKMGFSAI 240 KASTSKETLL RGSVNVTPTL ALALAPPGFQ REPESEEGYK RRRLSPENDD TTNFSNDVIK 300 VLRRNTNIMK TYLEAQNMNH QLAMEQQKEQ SDKLVAALGK ITDAITKIAD KL

Sequence ? help Back to Top

Protein Sequence Length: 352 aa Download sequence

MASNSQKIAE AASTDSPTAT PVGKQSATTT TEVVGDPKSE RIKPTRYPRW TRQETLLLIE  60
AKKMVENRDQ LCNLTPSSIL LNHTDPKWNI VSSCVQQQGV KRGPIQCRKR WGNLLTDFRK  120
VKKYESDMKD DGESFWMMRS DKRKENKLPG FFDEVVYKVI DGDDLSGAAV PLALMKMASK  180
PESSAEHAEK VKLLGQSKDD EDGDEDEEDE TIADSEKMYW STEKNTFEAN SERKMGFSAI  240
KASTSKETLL RGSVNVTPTL ALALAPPGFQ REPESEEGYK RRRLSPENDD TTNFSNDVIK  300
VLRRNTNIMK TYLEAQNMNH QLAMEQQKEQ SDKLVAALGK ITDAITKIAD KL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	280	284	KRRRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33550.1	3e-42	Trihelix family protein

Link Out ? help Back to Top
Ensembl	OIW17795