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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | OIW17790 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
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| Family | bHLH | ||||||||
| Protein Properties | Length: 339aa MW: 38192.7 Da PI: 6.6021 | ||||||||
| Description | bHLH family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | HLH | 26.4 | 1.3e-08 | 170 | 217 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
+h+ +Er RR++i ++++ L++l+P + + Ka +L + ++Y++sLq
OIW17790 170 SHSLAERVRREKISEKMNMLQKLVPGC----DNVTGKALVLDEIINYVQSLQ 217
8*************************9....66799***************9 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 339 aa Download sequence |
MAAFSYQYHP FLVDPSFIPN TPIIMSSFTH TQQSHINTAL TPSYDFHFLQ ANQEISCVDQ 60 TSKVSICDTD PCSVTKSNHS PDSSMVVDKL ENGEHVTQKV TSIEKKRRTR NGSLLSGSTS 120 KDSREVRSKK QKKSNDEVKE EEKKVEKEGP EQPPKGYIHV RARRGQATDS HSLAERVRRE 180 KISEKMNMLQ KLVPGCDNVT GKALVLDEII NYVQSLQNQV EFLSLKLASV NPMFFDLAMD 240 LDTPMKLNSI ASPTPTPSIP QCSLNHSTVF TDTFTMATNN TRGFPASAND YLLDYAYLQG 300 QRSNFFSEYS VGDQFWDVED QQQKFLKPYG FSNDSSSLN |
| Nucleic Localization Signal ? help Back to Top | |||
|---|---|---|---|
| No. | Start | End | Sequence |
| 1 | 105 | 132 | KKRRTRNGSLLSGSTSKDSREVRSKKQK |
| 2 | 105 | 147 | KKRRTRNGSLLSGSTSKDSREVRSKKQKKSNDEVKEEEKKVEK |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT5G50915.2 | 7e-48 | bHLH family protein | ||||
| Link Out ? help Back to Top | |
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| Ensembl | OIW17790 |
| ©2010-2022, Center
for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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