PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

OIW17757

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

C2H2

Protein Properties

Length: 1608aa MW: 181571 Da PI: 8.1158

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW17757	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.8	0.00035	1518	1540	3	23
ET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 3 Cp..dCgksFsrksnLkrHirtH 23 Cp Cgk F ++ +L++H r+H OIW17757 1518 CPvkGCGKKFFSHKYLVQHRRVH 1540 9999*****************99 PP
2	zf-C2H2	11.7	0.00079	1576	1602	1	23
EEET..TTTEEESSHHHHHHHHHH..T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt..H 23 y+C Cg++F+ s++ rH r+ H OIW17757 1576 YVCAepGCGQTFRFVSDFSRHKRKtgH 1602 899999****************99666 PP

Sequence ? help Back to Top
Protein Sequence Length: 1608 aa Download sequence
MADPEVLPWL KSLPLAPEYR PTASEFQDPI AYIFKIEKEA SRYGICKIIP PLPPSPKKTA 60 ISNLNRSQPS FTTRQQQIGF CPRRPHPVRR PVWQSGGHYT FKEFEAKAKA FEKTYLKKHC 120 SSKSNNVVAP SALEVETLYW KATLDKPFSV EYANDMPGSA FGPASNGGES VGDSAWNMRV 180 VSRANGSLLR FMKEEIPGVT SPMVYVAMLF SWFAWHVEDH DLHSLNYLHL GTSKTWYGVP 240 RDAAFAFEEV VRVHGYGGEI NPLDIIRHIC TASDQDIVSD CLLGFPRLPG GISAEPRSSR 300 LKDKRKGEGE TVIKELFVHD VLQNNGLLHV LGKGSAIVLL PHSSSDFSAC SKLRVGSQQL 360 NPESMDVSNP KGINSSKGLI SDDLAFVTNH GIRQVKGFYS VKEKFGTLWD SSLIVGGNIC 420 TSSSKTLQKD TERETNQGDG LSDQRLFSCV TCGILSFACV AIVQPREPAA RSLMSADYSF 480 FNDSIVGSGL TSNNFTVAHE GATIPKSCTR WTEQNAHEDL YDAPVQSIKQ QTQIADQNYV 540 EALNTEQRKG STALSLLASA YGDSSDSEED KGESDIAVEG DELNMINHPS AIRSKEISCL 600 PSHTQDCHAS PGVRLDRGGD IPSNSTESYE DYMHKRVEHI MSPSDYSVKS EDYDITSGVA 660 FKNMAAVRHS MSNCSQDAET SLLGKAVVPI DKHVSLVPLS DEDSSRMHVF CLEHAVEAEK 720 QLRPIGGAHI LLLCHPDYPK IEAEAKFVAE ELGIDYTWKN TAYRHANKDD EEKIQSALDS 780 EEATPGNGDW AVKLGINLFY SANLSRSPLY SKQMPYNSVI YYAFGCSFPA SSPTEPKVYR 840 RRGNRQKKVV AGKWCGKVWM STQVHPLLVK GDAEDVVDEK SLHGWPLHDE KMERSEGTYK 900 SNTIINSGRK RKMAVESGGS RKGSFAKSDC LSDDSIEDKS NHPKRRILRS KRTRHIEKDD 960 TVSEGDYSPL KHHRRPICKH TKGIESDAIS DDSLDDNSHI QLRKNVNAKE AEFIENDVVS 1020 DDTVGDDFDC SPREELSSKQ EAISEDSLGV GSLQLHRKTS KSKHGKYIDE DVISDDDRME 1080 VCFQKQQRRK PKTKQRKCLA ENITMASDDQ LEHHMRKQQQ KNPKSKQDKY LAGEDIISDD 1140 QLELHSHKYP RRTPKNKQAK CIVGKDVMSD GQLEKQRRSV PRSRQIKCCD REIMDDSAEN 1200 NSHLLCRTPK RRQPKCINED NINSDDQMED ESLQHRRTVR GKQSKSRTLQ HMKQAKCKDE 1260 DSANSDDQME DDSQQHSRTV RGKKSKPQTL QQMKQAKWKD EEDINSDDQI EDDSQQHRKT 1320 VRGKKSKSQI LQKMKQAKWE AEDNINSEYQ MEDDCQKNRK TVRSKQSKSQ TLQQMKQANS 1380 VRVRRPASQP VKRGAQTRMK SKTPRKMKQL PRVQNNQSEE EEEEEDVEGE GDGEEEEVEV 1440 TGPSTRLRKR VPKFEESEGK SKEKETKRNS VKSATTAKIS ARHAKIKEEV AEYQCDIEGC 1500 TMSFGSKLEL MQHKKNICPV KGCGKKFFSH KYLVQHRRVH EDDRPLKCPW KGCKMTFKWA 1560 WARTEHIRVH TGERPYVCAE PGCGQTFRFV SDFSRHKRKT GHTTKKSC

Sequence ? help Back to Top

Protein Sequence Length: 1608 aa Download sequence

MADPEVLPWL KSLPLAPEYR PTASEFQDPI AYIFKIEKEA SRYGICKIIP PLPPSPKKTA  60
ISNLNRSQPS FTTRQQQIGF CPRRPHPVRR PVWQSGGHYT FKEFEAKAKA FEKTYLKKHC  120
SSKSNNVVAP SALEVETLYW KATLDKPFSV EYANDMPGSA FGPASNGGES VGDSAWNMRV  180
VSRANGSLLR FMKEEIPGVT SPMVYVAMLF SWFAWHVEDH DLHSLNYLHL GTSKTWYGVP  240
RDAAFAFEEV VRVHGYGGEI NPLDIIRHIC TASDQDIVSD CLLGFPRLPG GISAEPRSSR  300
LKDKRKGEGE TVIKELFVHD VLQNNGLLHV LGKGSAIVLL PHSSSDFSAC SKLRVGSQQL  360
NPESMDVSNP KGINSSKGLI SDDLAFVTNH GIRQVKGFYS VKEKFGTLWD SSLIVGGNIC  420
TSSSKTLQKD TERETNQGDG LSDQRLFSCV TCGILSFACV AIVQPREPAA RSLMSADYSF  480
FNDSIVGSGL TSNNFTVAHE GATIPKSCTR WTEQNAHEDL YDAPVQSIKQ QTQIADQNYV  540
EALNTEQRKG STALSLLASA YGDSSDSEED KGESDIAVEG DELNMINHPS AIRSKEISCL  600
PSHTQDCHAS PGVRLDRGGD IPSNSTESYE DYMHKRVEHI MSPSDYSVKS EDYDITSGVA  660
FKNMAAVRHS MSNCSQDAET SLLGKAVVPI DKHVSLVPLS DEDSSRMHVF CLEHAVEAEK  720
QLRPIGGAHI LLLCHPDYPK IEAEAKFVAE ELGIDYTWKN TAYRHANKDD EEKIQSALDS  780
EEATPGNGDW AVKLGINLFY SANLSRSPLY SKQMPYNSVI YYAFGCSFPA SSPTEPKVYR  840
RRGNRQKKVV AGKWCGKVWM STQVHPLLVK GDAEDVVDEK SLHGWPLHDE KMERSEGTYK  900
SNTIINSGRK RKMAVESGGS RKGSFAKSDC LSDDSIEDKS NHPKRRILRS KRTRHIEKDD  960
TVSEGDYSPL KHHRRPICKH TKGIESDAIS DDSLDDNSHI QLRKNVNAKE AEFIENDVVS  1020
DDTVGDDFDC SPREELSSKQ EAISEDSLGV GSLQLHRKTS KSKHGKYIDE DVISDDDRME  1080
VCFQKQQRRK PKTKQRKCLA ENITMASDDQ LEHHMRKQQQ KNPKSKQDKY LAGEDIISDD  1140
QLELHSHKYP RRTPKNKQAK CIVGKDVMSD GQLEKQRRSV PRSRQIKCCD REIMDDSAEN  1200
NSHLLCRTPK RRQPKCINED NINSDDQMED ESLQHRRTVR GKQSKSRTLQ HMKQAKCKDE  1260
DSANSDDQME DDSQQHSRTV RGKKSKPQTL QQMKQAKWKD EEDINSDDQI EDDSQQHRKT  1320
VRGKKSKSQI LQKMKQAKWE AEDNINSEYQ MEDDCQKNRK TVRSKQSKSQ TLQQMKQANS  1380
VRVRRPASQP VKRGAQTRMK SKTPRKMKQL PRVQNNQSEE EEEEEDVEGE GDGEEEEVEV  1440
TGPSTRLRKR VPKFEESEGK SKEKETKRNS VKSATTAKIS ARHAKIKEEV AEYQCDIEGC  1500
TMSFGSKLEL MQHKKNICPV KGCGKKFFSH KYLVQHRRVH EDDRPLKCPW KGCKMTFKWA  1560
WARTEHIRVH TGERPYVCAE PGCGQTFRFV SDFSRHKRKT GHTTKKSC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G48430.1	3e-97	C2H2 family protein

Link Out ? help Back to Top
Ensembl	OIW17757