PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIW17171 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
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Family | LBD | ||||||||
Protein Properties | Length: 264aa MW: 30319.7 Da PI: 6.2599 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 131.1 | 4.6e-41 | 17 | 116 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallkee 100 aCaaCk++rrkCa+dC+lapyfp++++++f n+hklFG+sn++k++k l+++e+++am++++y++++ra+dPv G++++i++lq q+e +ael+l+ ++ OIW17171 17 ACAACKYQRRKCAPDCILAPYFPHDRQRQFLNAHKLFGVSNITKIIKFLEPHEKDQAMRTIIYQSDMRANDPVGGCFRHIQDLQAQIEYYHAELELVLQQ 116 7*********************************************************************************************998776 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 264 aa Download sequence |
MNYNNNNPRN GNNTTQACAA CKYQRRKCAP DCILAPYFPH DRQRQFLNAH KLFGVSNITK 60 IIKFLEPHEK DQAMRTIIYQ SDMRANDPVG GCFRHIQDLQ AQIEYYHAEL ELVLQQLAFV 120 RAQAHQQQQS QHVYNPTMSN VNVGINGEDV MSASDPLSLY NAPLTNQYHY ISQVPQHEHY 180 IMLPETNENN CSNNNNNAAL QEHVNAWTMQ NSMSLSSLSL QGQNSNASVG DEYDPKPMLE 240 IPCDERNELG FEVENLVHHR FVYH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G13850.1 | 2e-54 | LBD family protein |
Link Out ? help Back to Top | |
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Ensembl | OIW17171 |