PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIW16807 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
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Family | NF-YC | ||||||||
Protein Properties | Length: 113aa MW: 12465.5 Da PI: 4.7338 | ||||||||
Description | NF-YC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YC | 61.7 | 1.5e-19 | 13 | 61 | 48 | 100 |
NF-YC 48 skacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivprde 100 kacelfilelt+ h+eenkrrtl+k+dia+a+trtdifdflvd++ d+ OIW16807 13 YKACELFILELTI----HTEENKRRTLQKNDIATAITRTDIFDFLVDEIKDDD 61 69**********6....9******************************98876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 113 aa Download sequence |
MGFVLLLRIT LQYKACELFI LELTIHTEEN KRRTLQKNDI ATAITRTDIF DFLVDEIKDD 60 DALVAAGMVG ATISGVPYFY PLIGQAGGGG MMIGRPAMDH GSGVYAQAWQ LVW |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 32 | 38 | RRTLQKN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G63470.2 | 2e-35 | NF-YC family protein |
Link Out ? help Back to Top | |
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Ensembl | OIW16807 |