PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIW16677
Organism
Lupinus angustifolius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
Family RAV
Protein Properties Length: 344aa    MW: 38526.1 Da    PI: 7.1153
Description RAV family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIW16677genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP244.83.1e-1473121155
       AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
               s+ykGV   + +grW A+I++      ++r++lg+f t+eeAak ++ a+ +++g
  OIW16677  73 SKYKGVVPQP-NGRWGAQIYEK-----HQRVWLGTFNTEEEAAKVYDIAAHRFRG 121
               89****9888.8*********3.....5************************998 PP
2B398.83.2e-31199298192
               EEEE-..-HHHHTT-EE--HHH.HTT........---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS
        B3   1 ffkvltpsdvlksgrlvlpkkfaeeh........ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 
               f+k+ tpsdv+k++rlv+pk++ae+h        g+   +++ l +ed  g++W+++++y+++s++yvltkGW++Fvk+++Lk+gD+v F+ +   + ++
  OIW16677 199 FEKTVTPSDVGKLNRLVIPKQHAEKHfplqngvnGIAAGKGVLLNFEDVGGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDSVCFYKSTGPDNQM 298
               99****************************9998777889***************************************************443355555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 344 aa     Download sequence    
MDEGSCNDES TTTESLSITL PPTTTLLPFP TISKNMSPPP SNSLCRIGSG ASAIIDSDGS  60
SGTEAESRKL SSSKYKGVVP QPNGRWGAQI YEKHQRVWLG TFNTEEEAAK VYDIAAHRFR  120
GKDAITNFKA LDGGNDDIEA EFLNLHSKSE IVDMLRKHTY NGELDQSKRN LGFFDRRLSR  180
GTAANTGGAC GNTAREQLFE KTVTPSDVGK LNRLVIPKQH AEKHFPLQNG VNGIAAGKGV  240
LLNFEDVGGK VWRFRYSYWN SSQSYVLTKG WSRFVKEKNL KAGDSVCFYK STGPDNQMFI  300
DWKVRNVNEV GLVEPGFEPV QYWWMLQWEE ERDGNVYIRV YQEA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G25560.11e-125RAV family protein