PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

OIW16157

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

C2H2

Protein Properties

Length: 283aa MW: 31459.5 Da PI: 8.4077

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW16157	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.9	0.00016	60	82	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C++ F++ L H+++H OIW16157 60 YSCTFCKREFRSAQALGGHMNVH 82 99*******************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 283 aa Download sequence
MMEESEYLMW MKRKQLFKSH LQAVEDGSNN NYYYSSWAER AFAEDAGRVL GGSMWPPRSY 60 SCTFCKREFR SAQALGGHMN VHRRDRARLN QNLSPNNDQT LVELDHHKND CKSLGTQLFS 120 QISCSQQLHC CLNPNSSLAT SITTTRISPS GLSGISKGKN CGQHILSPYS STINIGSPYS 180 EHEGIVDATE EGKFKGLGCN NYVETSLSVG LSSSMFPQKS SPIIPSGDKT MISCKRLKTN 240 ISSLPVKSLK PCSNDRGVDF QSAEVIMEDL DLELRLGKQQ KVK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06070.1	1e-27	C2H2 family protein

Link Out ? help Back to Top
Ensembl	OIW16157