PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW15947

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

Trihelix

Protein Properties

Length: 438aa MW: 49747.8 Da PI: 6.3335

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW15947	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	66.4	6e-21	116	212	1	85
trihelix 1 rWtkqevlaLiearremeerlrrgk...........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrt.sessstcpyfdql 85 +Wt+++v++L++++ ++++ + +kk++W+ vsk m ++g+++sp+qC++k++++nkryk+++++ +++t ++++++ ++ d++ OIW15947 116 KWTDNMVRLLVAVVCCVGDDGTINGmdghkrksavlQKKGKWKTVSKIMISKGCHVSPQQCEDKFNDMNKRYKRLNDILGRGTcCQVVENPALMDSM 212 7***********9555555533222333444566********************************************757888888887777 PP

Sequence ? help Back to Top
Protein Sequence Length: 438 aa Download sequence
MNSSGLGGGF LSGPSGGILD LESPFHRHQH AQLGHPSVTS QQNINIMGGL ENDHPIGPTE 60 VKCSNAGLSF GKGKGIVASN PADSNDFSED DEAEDGNCDN FDVGKGKKGS PWQRMKWTDN 120 MVRLLVAVVC CVGDDGTING MDGHKRKSAV LQKKGKWKTV SKIMISKGCH VSPQQCEDKF 180 NDMNKRYKRL NDILGRGTCC QVVENPALMD SMPKLSTKAK DDVRKILSSK HLFYKEMCAY 240 HNGKGIPNYQ DLDLQGYSLE HGRDSRDNNG SDEEAEDNNE SEDDELHEDG EKMEFYGRNK 300 LSEDDDRFLS QCVTVDKFEA EMARIFQDPS KSLFERKEWI TMQAFKLQEQ KVSYEAQALE 360 LEKQRFKWLR YCSKKDRELE RLRLEKERMK LENEQKILKL KLKEHETDFS RTDMSLDPVS 420 LGINRPQGRE HINLGRQQ

Sequence ? help Back to Top

Protein Sequence Length: 438 aa Download sequence

MNSSGLGGGF LSGPSGGILD LESPFHRHQH AQLGHPSVTS QQNINIMGGL ENDHPIGPTE  60
VKCSNAGLSF GKGKGIVASN PADSNDFSED DEAEDGNCDN FDVGKGKKGS PWQRMKWTDN  120
MVRLLVAVVC CVGDDGTING MDGHKRKSAV LQKKGKWKTV SKIMISKGCH VSPQQCEDKF  180
NDMNKRYKRL NDILGRGTCC QVVENPALMD SMPKLSTKAK DDVRKILSSK HLFYKEMCAY  240
HNGKGIPNYQ DLDLQGYSLE HGRDSRDNNG SDEEAEDNNE SEDDELHEDG EKMEFYGRNK  300
LSEDDDRFLS QCVTVDKFEA EMARIFQDPS KSLFERKEWI TMQAFKLQEQ KVSYEAQALE  360
LEKQRFKWLR YCSKKDRELE RLRLEKERMK LENEQKILKL KLKEHETDFS RTDMSLDPVS  420
LGINRPQGRE HINLGRQQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G21200.1	2e-65	Trihelix family protein

Link Out ? help Back to Top
Ensembl	OIW15947