PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

OIW15786

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

C2H2

Protein Properties

Length: 301aa MW: 32639.6 Da PI: 8.8104

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW15786	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.1	3.2e-05	129	151	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C+k+Fs+ L H+ +H OIW15786 129 YECKTCNKTFSSFQALGGHMASH 151 99******************999 PP
2	zf-C2H2	13.3	0.00024	211	233	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cg F++ L H+r+H OIW15786 211 HECSICGAEFTSGQALGGHMRRH 233 78********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 301 aa Download sequence
MVMEEQLVEL SHNNNDANHV VKGKRTKRQR PLSPCAVAAT AVTSSCSSAT SGAGDHGSTF 60 SSPTTTFDKT RNEEEDMANC LILLAGGKRE GNDARNNKNM TIAPTTNTTI TATATTITTT 120 TTKIGFYDYE CKTCNKTFSS FQALGGHMAS HKKPKMTLEE KKLPPSLSSS GIFKIKEANQ 180 THIKSSPQIP TSLQLGCPNN KTFDGNKSKF HECSICGAEF TSGQALGGHM RRHRTSTNSR 240 TNTSTKTSFD ATSTTIEVKP RNVLEFDLNL PAPDEDISDS NFQFTTTSKS MVLPAMVGCR 300 Y

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28200.1	1e-46	C2H2 family protein

Link Out ? help Back to Top
Ensembl	OIW15786