PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIW15343 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
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Family | GATA | ||||||||
Protein Properties | Length: 184aa MW: 21459.2 Da PI: 6.9846 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 56.6 | 3.6e-18 | 119 | 153 | 1 | 35 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 Cs+C + Tp+WR+gp g+ktLCnaCG++y++ +l OIW15343 119 CSHCEAEVTPQWRNGPMGPKTLCNACGVRYKSGRL 153 *******************************9885 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 184 aa Download sequence |
MAFENCKFDI GEFQDLVFDN IESGSSDNLS EFESQLCVPQ DPIEELENFP YFPNDFISLN 60 EVEWVMPELE QNKEKEELKA KQQNKEVVEF LVHGFVGKKA RTKNYHKPKC EVKWVKKRCS 120 HCEAEVTPQW RNGPMGPKTL CNACGVRYKS GRLVSDYRPA NSPTFDSSIH SNYHRNIMKR 180 RRCS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G60530.1 | 2e-32 | GATA family protein |
Link Out ? help Back to Top | |
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Ensembl | OIW15343 |