PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

OIW15073

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

LBD

Protein Properties

Length: 179aa MW: 19832.6 Da PI: 6.7704

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW15073	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	121.4	4.8e-38	11	110	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallkee 100 +CaaCk+l+r+C+++Cv+apyf +++ +kfa vhk+FGasnv+k+l ++p+e+red+++sl++eAear+rdPvyG++g i lq ++ l+++la +k++ OIW15073 11 SCAACKLLKRRCTPNCVFAPYFHSDECNKFAKVHKVFGASNVSKILIEVPQEHREDTVNSLAFEAEARLRDPVYGCIGDIVLLQMKMVDLQHDLAIAKDR 110 6*********************************************************************************************999875 PP

Sequence ? help Back to Top
Protein Sequence Length: 179 aa Download sequence
MKGYESRSSS SCAACKLLKR RCTPNCVFAP YFHSDECNKF AKVHKVFGAS NVSKILIEVP 60 QEHREDTVNS LAFEAEARLR DPVYGCIGDI VLLQMKMVDL QHDLAIAKDR LARCAAATAT 120 ATTTTSDDVL HATHASLPHL RGFSTSNDFN DSLCHGSSSS ELLRRHEIMD DCIEIPYIL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G11090.1	5e-59	LBD family protein

Link Out ? help Back to Top
Ensembl	OIW15073